Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1639 |
Symbol | |
ID | 5411184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1717202 |
End bp | 1718038 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640868873 |
Product | ABC transporter related |
Protein accession | YP_001404799 |
Protein GI | 154151181 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000187307 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGACGA TATTCGACCT GCGCGATGTA TCCTACACCT ACCTGAGAAG GTTCGAAGCG CTCAGGAATG TGACTCTGTC TTTTAAGGCC GGGGAGCAGA CCGCCATCCT TGGAGCCAAC GGAAGCGGTA AATCTACGCT CCTTTCGATC CTGAATGCGC TGACATACCC GACTTCAGGT GAATTTTCTG CGTTTGGAAC CCCGGTAAAA GAAGAGGTAT TTGACACTCT CGAAGATAAT GAATATGCCC GGTTCTTCCG GAAAAAGGTG GGTTTTTTAT TCCAGAACCC GGATATCCAG CTCTTCTCAT CAACGGTCTT TGATGAAATT GCCTTTGGGC CGCTCCAGCT TGACCTCCCT CCGGATGAAG TACAAAAAAG AACAGACGAG GTTATCGCGA TGCTTGGGAT CGAGAACCTC CGGGACCGGG CGCCCCATAT GCTAAGCGGC GGTGAAAAAA AGAAGGTTTG TATCGCATCG ATCCTGTCTA CAAATCCCGA TGTCCTGCTC CTTGATGAGC CCTCCGGTGG TCTTGACCCG CGCAGCCAGG CCTGGCTGAT TGAGATCATC CAGGATCTTG CAAAGGCCGG GAAAACGATT ATTACGGCAA CGCATGACCT TGACATTGTC GAACAGATCA GCACCCGTGC CATTGTGGTC GGGGAAGACC ATACGATACA TGTTGATTGT GACTGTGCAA GTGTGATGGA CAATCTTGAG CTGCTGATGT CGGCAAATCT CATCCACCGG CACATGCACC GGCACGGCAA ACTTCTTCAC GAGCACCTGC ATGCCCACTC AAAAGAGCAC GACCATGTGC ATAGTGATGC TTCCTGA
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Protein sequence | METIFDLRDV SYTYLRRFEA LRNVTLSFKA GEQTAILGAN GSGKSTLLSI LNALTYPTSG EFSAFGTPVK EEVFDTLEDN EYARFFRKKV GFLFQNPDIQ LFSSTVFDEI AFGPLQLDLP PDEVQKRTDE VIAMLGIENL RDRAPHMLSG GEKKKVCIAS ILSTNPDVLL LDEPSGGLDP RSQAWLIEII QDLAKAGKTI ITATHDLDIV EQISTRAIVV GEDHTIHVDC DCASVMDNLE LLMSANLIHR HMHRHGKLLH EHLHAHSKEH DHVHSDAS
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