Gene Mboo_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1605 
Symbol 
ID5412200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1679142 
End bp1679630 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID640868839 
ProductGrpE protein 
Protein accessionYP_001404765 
Protein GI154151147 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0303276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.370472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA TTGAAGAGCT CAAAAAGGAA CTCGCAGAAC AGACCCGGCT TGCTGAGGAA 
CGCCTCAATC AGCTGCAATA CCTCCAGGCA GATTTCGACA ATTTCCGCAG GTGGAGTGCA
AAGGAAAAGG AGACGATCAC CGCCCTTGCA AACGAGAAAC TGATCCACGA TCTCCTGGTT
ATCCTCGACG ATTTCGAGCT GGCCCTGCCT TCCTTAGAGC AGGAGAAAAA CCGGGAAGGA
ATGACCATGA TCTATAAAAA ATTTGCAAAA ATCCTGTCCG ACTATGGATT GCAACCGATA
GAATGCGTGG GAAAAAAATT CGATCCCCAT TACCACGAAG TACTTTGTAC AGAAAAATGC
CCGCAGGAGC AGAACACGAT CCTTGAAGAC TTCGGGAAAG GCTACCAGTT GAAATCCAAA
GTCATCAGGC CCTCGAAAGT AAAGATTGCA GAACATGTAA CAGAGAAAGT TGGTGAGAAC
AATGGCTAA
 
Protein sequence
MEDIEELKKE LAEQTRLAEE RLNQLQYLQA DFDNFRRWSA KEKETITALA NEKLIHDLLV 
ILDDFELALP SLEQEKNREG MTMIYKKFAK ILSDYGLQPI ECVGKKFDPH YHEVLCTEKC
PQEQNTILED FGKGYQLKSK VIRPSKVKIA EHVTEKVGEN NG