| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1591 |
|---|
| Symbol | |
|---|
| ID | 5410905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1660547 |
|---|
| End bp | 1661485 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640868825 |
|---|
| Product | ribonuclease Z |
|---|
| Protein accession | YP_001404751 |
|---|
| Protein GI | 154151133 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | [TIGR02651] ribonuclease Z |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.125239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGCG AGACCCTCCA GGTCTATTTC CTCGGGACGG CGGGAGCGCT TCCTACCCCG
GTGCGCAACC CGTCCTGCAT CATGATCCGG CGCGGCACCG ATACGCTCCT CTTTGACTGC
GGGGAAGGCG CCCAACAGCA GATGATGCGG GCCCGGTGCG GGTTTACCAT CGATGCGATC
TTTGTCTCCC ACTGGCATGC CGATCACTTC CTTGGGATCT TCGGCCTTGT CCAGACCATG
TCCTTTAACG GCCGTACCGA ACCTTTGACC ATTTACGGCC CTTCCTGGGT GCACGACTTT
GTCGAGACTG TAAAGAAAGT GAGCCGGTTC AATCTCAAAT TTACCCTGGA TTCTGTCGAA
CTCGAAGAGG GCTCATGGGT GCGCTTTGAA GGTTACACGA TCACCGCCTT TGCCGCAAGC
CACGGCCTGC CGGCGCTTGG CTACGTGCTC GAAGAAGACC CGCGGCCGGG CCGGTTCGAT
CGCGAGCATG CCATAGAACT CGGCGTCCCC GCAGGACCGC TCTTTGGCCG GCTTCAGCGC
GGCGAGACCG TGAAGGTGAC AAAGGACGGA GAGGAGCGGG AGGTGCTGCC TTCGGACGTG
ATGGGCGAAC CCCGCCCGGG CCGGAAAGTG GTGTACACCG GCGATACCCG CCCGATTATC
CCGGCCCTTG TTGCGTACGG GAAAAATGCC GATCTCCTCA TCCACGATGC AACCTACGAT
GAGAGCGAAA AGGCACGGGC CGCAGAATTC TACCACGCCA CCGCAGCGCA GGCCGGCCAG
GCAGCAGCGG CCATGAATGC CCGGACCCTT GTCCTCACCC ACATCAGCTC ACGGTACACG
GACACCTCTG CTCACGCTGC CGAAGCAAAG GCTGCGTTTA CCGGGACTAT TGTTGTCCCG
GATGATCTCT TGATGCTGGA TGTTCCCTGG CAGAACTAA
|
|---|
| Protein sequence | MSGETLQVYF LGTAGALPTP VRNPSCIMIR RGTDTLLFDC GEGAQQQMMR ARCGFTIDAI
FVSHWHADHF LGIFGLVQTM SFNGRTEPLT IYGPSWVHDF VETVKKVSRF NLKFTLDSVE
LEEGSWVRFE GYTITAFAAS HGLPALGYVL EEDPRPGRFD REHAIELGVP AGPLFGRLQR
GETVKVTKDG EEREVLPSDV MGEPRPGRKV VYTGDTRPII PALVAYGKNA DLLIHDATYD
ESEKARAAEF YHATAAQAGQ AAAAMNARTL VLTHISSRYT DTSAHAAEAK AAFTGTIVVP
DDLLMLDVPW QN
|
|---|
| |