Gene Mboo_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1505 
Symbol 
ID5410879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1568799 
End bp1569695 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content56% 
IMG OID640868740 
Producthypothetical protein 
Protein accessionYP_001404666 
Protein GI154151048 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0162675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC ATCTTATTCT GGGAGTGTTT TTGGTATTGG GCGCAGTACT TCTCATTACG 
GGATGTACCC AGAACGCGGC TCCTGCCCAG GCGTCGCAAC AGGTAACCCA GCAGTTAACT
GCCCCCGCAT CATCCGACAC GGTCAGGGTT GCCTCAAGCA CGCTCGGAAA TATCCTTGTG
GATGCGCAGG GAAAGTCTCT CTATTATTTT GCCGCTGACA TACCGGGAAG CGGTGCGAGC
ACCTGCAGCG GTTCGTGTGC CGGCATCTGG CCGGTCTTTT ACAGCAATAC CATCACGGTG
TCGCCCCCGC TTGTGGCATC CGATTTTTCA TCCTTTGTCC GGGCCGACGG GACAAGCCAG
ACCGCGTACC GGGGATGGCC GCTCTACTAT TTCCAGGGAG ACAGCGGAGC CGGGGATGTC
TCAGGTGAGA ACGTGAACAA GGACTGGTTT GTAGTCCGGC CGGATGAGAC CATAATGATT
GCCCAGCGCA GCACTCTTGG CCTGTACCTT ACCGACCGGA TGGGAAACAC CCTGTATTAT
TTTGCAAAGG ACACCCCGGC CACGAGTGCC TGTACCGCCG CATGCCTTGC AAAATGGCCC
CCGTTCTACG CAGGCACCAT CAGTGCCCCC TCAGTTCTGG ACCCGTCAGC ATTTGGCACG
GTGGCAAGAG CTGACGGCAG GAACCAGACC GCATTCATGG GTATGCCGCT CTATTATTTC
GCAAACGATA CGCAACCCGG CGAGACAAAC GGCGAGGGGT TCAACAACCT CTGGTACGTG
GCAAATATCA CCGGTACGAT ACCTGCTGTG CCTGTTGCAG TACCCACGGC AGAACCTACC
CCGGTCCCGA CAACGGCAAA CCCGACACAA TCCATAATGT CGTACGGAGG ATATTAA
 
Protein sequence
MNDHLILGVF LVLGAVLLIT GCTQNAAPAQ ASQQVTQQLT APASSDTVRV ASSTLGNILV 
DAQGKSLYYF AADIPGSGAS TCSGSCAGIW PVFYSNTITV SPPLVASDFS SFVRADGTSQ
TAYRGWPLYY FQGDSGAGDV SGENVNKDWF VVRPDETIMI AQRSTLGLYL TDRMGNTLYY
FAKDTPATSA CTAACLAKWP PFYAGTISAP SVLDPSAFGT VARADGRNQT AFMGMPLYYF
ANDTQPGETN GEGFNNLWYV ANITGTIPAV PVAVPTAEPT PVPTTANPTQ SIMSYGGY