Gene Mboo_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1475 
Symbol 
ID5409857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1515303 
End bp1516208 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID640868710 
Productnitrite/sulfite reductase hemoprotein beta subunit 
Protein accessionYP_001404636 
Protein GI154151018 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0347931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCG AGTCCGGCAT TCATATGAAA GGGGGCGTGA TCACCGAGCG GGATCCCGGT 
TTTATCACCG TCCGCATACG GGCACCGGCA GGTTCCCTGA CCGCAGAACA GATCCGGGGA
ATAGCCGCCA TATCAAAAAA ATACGGGGCC GGAACCGTGC ACTGTACCAC ACGCCAGTCC
CTGGAGATTC CCCATGTCCG GCCCGCTTCC CTCAAACGGA TCGCGGCCCG GCTTGAAAAA
AACGGCACCC CGATCGGATC CGAGAAAGAC GAGATCGTCA ATATCACCTC GTGCCCGGGG
ACCGAGCGCT GCAAGTTTGC CAATATTGAT ACGATTGGCC TTGCACAGAA GATCGACAAA
AAACTCTTTG GGAAGGCGAT GCCGGTAAAG ATGCGCATCG CACTCTCGGG GTGCCCCAAT
GCCTGCACAA GCCCGATGCT CAACGAGATC GGGATCATAG GCAGGATCCG GCCGGTCCGG
ACTGCCGGGC TCTGTACCGG GTGCGGCTCG TGCGTGTACT ACTGTAAGGA AGAGGCGATA
AAGATCCGCA ACGGGATCTC CGAACTTGAT GAGAAGAAGT GTGTCCTGTG CGGGATGTGC
GTTACCTCCT GTTCCTTTAA CCTGTTAAAA GAAGCCCACA CCCATTTCCT TATCACGGTC
GGCGGGCGCC GGGGCCGGCA CCCAAAAATC GGGAGGGAAC TCCTGACCGT GGAGACCGAG
GACCAGGTCC TCTTTGCCAT AGACCGGATC GTTGACTGGG TGTACCGCCG GGCCTGGAGC
GGCAGGCTGC TCTCTGAACA GCTCGATGAA ATCCAGTTCG AAAAGCTCCG GGACGAGATC
GCAGCAACCC TGCCAAAGGC AGGGCCGGAA AAACCGGATC TCCCGGCAGA CAAGCGAGCG
TTATAA
 
Protein sequence
MYPESGIHMK GGVITERDPG FITVRIRAPA GSLTAEQIRG IAAISKKYGA GTVHCTTRQS 
LEIPHVRPAS LKRIAARLEK NGTPIGSEKD EIVNITSCPG TERCKFANID TIGLAQKIDK
KLFGKAMPVK MRIALSGCPN ACTSPMLNEI GIIGRIRPVR TAGLCTGCGS CVYYCKEEAI
KIRNGISELD EKKCVLCGMC VTSCSFNLLK EAHTHFLITV GGRRGRHPKI GRELLTVETE
DQVLFAIDRI VDWVYRRAWS GRLLSEQLDE IQFEKLRDEI AATLPKAGPE KPDLPADKRA
L