Gene Mboo_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1464 
Symbol 
ID5409846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1503164 
End bp1504903 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content52% 
IMG OID640868699 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001404625 
Protein GI154151007 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.164507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGAAC ATCCAAAACC CGTGCCGGCA AAGGAGATTC TCATTGTCGA AGACAGTCAC 
GTTCAGGCTG AGATCCTTAA GCATATCCTC GATAATGCCG GTTACACCTG CCAGGTTGCA
GAAAACGGGG AAAGGGCCCT TGAGGTCCTG GCCCGGAAGA TCCCCGATCT TATTATCAGC
GATATCATCA TGCCGGTGAT GAACGGGTAC GATCTTTGCC GGGAGATCAA AAAGAACGTG
AGAACGAAAA ATATCCCCCT TATCCTCCTC ACGGCCCTTT CCGATTCCCG GGACATTGCC
CTTGCCATTG AATCTGGTGC CGATAACTTT ATCACAAAAC CCTACCCGGC CGATTATCTT
CTCCAGCGTA TCAGGAAGAT CCTTGAAAAT CGCCGTCCCC CGATATCTGA GAAAGCCGAC
GCCGGATCAG TACCATTCCT GTATGAAGGG AAGACCTACT CTATCGGGAT GGACCGTGTC
AGGATTCTGG ATTTTCTTCT CTCGGCGTAT GAAGCTGCTG TGATCCAGCA CAGGGAATTC
CAGCGATCCC AGAAAGAACT CCGTACTACA AATGAGAGGA TCAACATCCT CAACCAGATC
ATCAGTGTCA GCAATTCGTC GATGAAACCA GATGCCCTGC TGGAAAGCAT CTTACATAAG
GCCCTATCTA TCCAAGGATT TGAAATGGGG GCACTGTACC TGAATAATAC CGGGAAAACC
GAAGCGACAA TGATCTGTTA CCAGGAAACG GCCCCGGCCA GCTCTGACCT CCGTGTCCTC
ATGGGTGTCC TGAATTTCGG TGAACCCCTG TACCAGGAAC TCTGCATCCG TGGCATTCCC
CAGTTCGTAG ACCTTTCAAA GGATACCCCT GTCAGCCGGG ACAGCATTAT TCTCCGGGAT
CTGGGAGCCC GGTCGCTTGC CCTGCTCCCG CTTGTTTCAG CATCGACCGT GATCGGTGCA
ATGGCATTCA TCAGTACAAG GAAACATGAT TTCTCTGACC AGGAGCGGTC GCTTCTTTCC
CTGATCAGCA CCGAGATCGG GAATGCAGTC CAGAAGATCC TCCTCTTAAA ACGTCTTGAG
CAGTCTAATG ACGAGACCAA CCTCTACCTT GACATCATGT CCCATGATAT CAACAATGTC
AATGCCGGTG CCCTCATGCA GCTTGAACTC CTTTATGAAT CGCTTGACGC CGAGAACAGG
AAAATGGCCG AGACCATCAT GAGGGCTATC GACCAGTCCG TTGAAATCAT CGGGAATGTC
TCTACGATCC GCAGAATGCA CGAGCAGAAA GCGGCATTAC GGCCGATCCG TCTTGACGAG
GTCATCCGGG CCGAGACCGG GCGGTACTCC GGAGTTATCT TCCATTATGC CGGAACGGAT
GCGGTTGTTA TGGCAGATGA CCTGTTCGGC CAGGTCTTCA CCAACCTGAT AGGAAACAGC
GTAAAATTCT GTACAGAAAA CCCTGAGATT ACCATAACTG TCGAAGACCG GGCAGAACAG
GTTCAGGTTA CGGTGGCCGA TAACGGCCCG GGAATCCCTG ACGAGCTCAA ACCTGAGGTC
TTTGACCGTT TCCGCAAAGG AAAAAGCAAG AAAAGCGGGA AGGGGCTGGG GCTTTTTATT
ACCCGGCACC TTATCGAAGG GTATGGGGGG CGCATCTGGG CCGGTGATCG TATTTTCGGC
CGGCAAGACC AGGGTGCAGC AATTCATTTT ACCCTGATTC CTGCCGAGTA CCCGGTATAA
 
Protein sequence
MAEHPKPVPA KEILIVEDSH VQAEILKHIL DNAGYTCQVA ENGERALEVL ARKIPDLIIS 
DIIMPVMNGY DLCREIKKNV RTKNIPLILL TALSDSRDIA LAIESGADNF ITKPYPADYL
LQRIRKILEN RRPPISEKAD AGSVPFLYEG KTYSIGMDRV RILDFLLSAY EAAVIQHREF
QRSQKELRTT NERINILNQI ISVSNSSMKP DALLESILHK ALSIQGFEMG ALYLNNTGKT
EATMICYQET APASSDLRVL MGVLNFGEPL YQELCIRGIP QFVDLSKDTP VSRDSIILRD
LGARSLALLP LVSASTVIGA MAFISTRKHD FSDQERSLLS LISTEIGNAV QKILLLKRLE
QSNDETNLYL DIMSHDINNV NAGALMQLEL LYESLDAENR KMAETIMRAI DQSVEIIGNV
STIRRMHEQK AALRPIRLDE VIRAETGRYS GVIFHYAGTD AVVMADDLFG QVFTNLIGNS
VKFCTENPEI TITVEDRAEQ VQVTVADNGP GIPDELKPEV FDRFRKGKSK KSGKGLGLFI
TRHLIEGYGG RIWAGDRIFG RQDQGAAIHF TLIPAEYPV