| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1454 |
|---|
| Symbol | |
|---|
| ID | 5411399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1490048 |
|---|
| End bp | 1492150 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640868689 |
|---|
| Product | polyphosphate kinase |
|---|
| Protein accession | YP_001404615 |
|---|
| Protein GI | 154150997 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0855] Polyphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.642345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0713847 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC CTGTTCCCCC CCATGATTCC CCCTCGCTGT ACATCAACCG TGAACTGAGC
TGGATCCGGT TCAACCACCA CGTACTGGAA GAGGCGCAGG ATGAGCGCCA TCCGCTCCTT
GAACGGGTAA AATTCCTGTC GATCTTTGCA AACAACCTCG ATGAGTTCTT CATGATCCGG
GTATCGGGTC TCCAGCGGCA GGCGGCAAAA GGGGTACTCA GGGCTCCACC CGATGGGATG
ACACCGTCAG AACAGATACT TGCCATTGAA AAGGCGCTTA TTCCCGAATT GGATCTCTCG
TTTGAATGCT GGAGCAGCGA GATCCTGCCC CGGCTCGCCG CTGCCGGTAT TTTTATTCAC
GAATATAACG AGCTCGACGA TGAGCAGAAG CGTGTTCTGC GCACGTTCTT TGTCGAGGAG
GTATTTCCGG TACTTACTCC GCTCGCATTC GATTCCGCCC ATCCGTTCCC TTTCATCTCC
AACCTCTCAC TCAACCTTGC GATTACCATC CGTGATCCCC GGGGAAAGGA ACTCTTTGCC
CGGATCAAGG TACCTACCGG GCTCTTTCCA CGGCTTATCC GGATCCCGGA CACGCACTCT
TCCGGCCGGC GTGACGACAA GCAGGTGCAC CTCGTGTACT TAGAAGACCT CGTTGCCGCG
CACCTCGACC TGCTCTTCCC CGGCCTAGAA GTGATCGGAG CCTCACCCTT CCGTATTACC
CGGGATGCTG ACCTGGACAT TGAAGTCGAC GAGGCATCCG ATCTTCTGAC AACAGTTGAG
GAGATCATGG AACAGCGGGC CAGAGGCACC CCGGTCAGGA TTGAAGTGGA CTGCTCAATG
CAGGAGAGCA CCTGCCACAT GCTCGAAAAG AAACTGGGCA CCAGTTCTCA CATGCTGTAC
CGGATCGGCC ACCCGGTCGG GATGGCAGAT CTCATGGAGC TTCTCTCTCT TGACCGTCCC
GACTTGAAAG ATCCCCCGTT CCAACCCTCG GTCCCCCCGG AGCTTGCCGA GGAAAAGGAT
ATCTTCTCTG CCATAAAACG AAAAGATATC CTTCTCTTCC ATCCCTACGA CAGTTTCGCC
CCGGTCATCA ATTTTATCCG GCAGGCAGCC CATGATCCGG GAGTGCTTGC CATCAAGATC
ACCCTGTACA GGGTGGGATC CAACTCCCCC ATTGTAAAAG CACTCATGGA GGCCCGGGAG
AACGGGAAGG CTGTGGCAGC CTTAATCGAA CTCAAGGCAC GGTTTGACGA GGAAAACAAC
ATAGGCTGGG CCCGGGCGCT GGAAAGGTCG GGAGTACATG TGGTGTACGG CGTTGTGGGT
CTCAAGGTGC ACGCGAAACT TTGCATGGTT GTCCGCAGGG AAAAAGACGG TATCCGTAGG
TACATGCACC TTGGAACCGG CAACTACAAT GCCACCACCA GCCGGATATA CACGGATTTT
GGCATGTTTA CCTGCGACCG CGAGATTGGA GACGATGTGG CAAACCTCTT TAACTTCCTG
ACCGGCTATG CACGTTTCGA TCAGTACAGG AAACTCTCCG TGGCCCCGGT CACGCTCCGG
TCTGCTATCC TCTCACGCAT TGACCGGGAA ATTGAAAGTC ACAAGAAGCA TGGAGGCGGC
CACCTCATCT TCAAGATGAA TGCACTTGTG GACGAAGAGT GCGTTACTGC CCTTTACCGG
GCATCGCAGG CAGGCGTGAA AGTCGATCTC CAGGTAAGGG GTATCTGCTG CCTGCGACCC
GGCATCCCGG GTGCAAGCGA AAATATCACG GTGAGCGCGA TTGTCGGGCG CTTTTTAGAG
CATGCGCGGA TCTACTACTT CCGGAACAAT GGCGAGGACG AGGTACTGCT TGGAAGCGCT
GACCTCATGC CCCGTAACCT GGACCGCAGG GTTGAGGTGC TTTTCCCGGT TATGGATCCC
TCAATCAAGA AAGCATTGCT CTCGGTGGTC CTGGACGCGG AACTGCGCGA CAACCAGCAG
CTCCGGCTGA TGAAGGGTGA CGGGACGTAC GAGAGAAAAC ACCCTGCTCC GGGTGAGGAG
TCGGTCGATT CCCAATCCTG GTTCCTCGAC CATATGGGGA TATGGTACCA TGTCGGACCC
TGA
|
|---|
| Protein sequence | MTDPVPPHDS PSLYINRELS WIRFNHHVLE EAQDERHPLL ERVKFLSIFA NNLDEFFMIR
VSGLQRQAAK GVLRAPPDGM TPSEQILAIE KALIPELDLS FECWSSEILP RLAAAGIFIH
EYNELDDEQK RVLRTFFVEE VFPVLTPLAF DSAHPFPFIS NLSLNLAITI RDPRGKELFA
RIKVPTGLFP RLIRIPDTHS SGRRDDKQVH LVYLEDLVAA HLDLLFPGLE VIGASPFRIT
RDADLDIEVD EASDLLTTVE EIMEQRARGT PVRIEVDCSM QESTCHMLEK KLGTSSHMLY
RIGHPVGMAD LMELLSLDRP DLKDPPFQPS VPPELAEEKD IFSAIKRKDI LLFHPYDSFA
PVINFIRQAA HDPGVLAIKI TLYRVGSNSP IVKALMEARE NGKAVAALIE LKARFDEENN
IGWARALERS GVHVVYGVVG LKVHAKLCMV VRREKDGIRR YMHLGTGNYN ATTSRIYTDF
GMFTCDREIG DDVANLFNFL TGYARFDQYR KLSVAPVTLR SAILSRIDRE IESHKKHGGG
HLIFKMNALV DEECVTALYR ASQAGVKVDL QVRGICCLRP GIPGASENIT VSAIVGRFLE
HARIYYFRNN GEDEVLLGSA DLMPRNLDRR VEVLFPVMDP SIKKALLSVV LDAELRDNQQ
LRLMKGDGTY ERKHPAPGEE SVDSQSWFLD HMGIWYHVGP
|
|---|
| |