| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1436 |
|---|
| Symbol | |
|---|
| ID | 5410753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1471376 |
|---|
| End bp | 1472653 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640868671 |
|---|
| Product | MgtE intracellular region |
|---|
| Protein accession | YP_001404597 |
|---|
| Protein GI | 154150979 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000684076 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000760195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAA ACGAGACTGC CACAGGGGCG GCAAAAGCGG CGGACAAGGA GATCTTCCTT
TCCGAAATCC TCGGTATCCC GGTCCTGAGC AGAGAAAAGA AGATAGGAAC TTTAAGTGAC
CTGATCATCG TGGAGACCGC GAAGATCCCT GAGGTAAAAT CGCTCTACGT CAAGAGGTCA
TTTGGGTACC CCAGCCTGAT CATTCCCTGG GAGAACGTGG TGGAGCTGGG GCACCGGGTC
ATTGTCGATA TTCCGGCACT TGAACCCTTT GAGGCTAATC CCCCTGAGGA CGCACTCCTC
CTCAAGGACT ATGTAATGGA TAAAAAAGTC CTTGATCTTG AAGAGAGCGA GGTAGAGGTA
GTGTACGATA TCCGCCTGGT CCACCGGAAC AAAAAACTCT ATGTAACGGA CGTGGACACG
GGCAAGTCTG CCCGACTGAG GAGATTTGGC CTGAAAACAC TCTCCCGGGT ATTCTCTTCT
GAGGAACCCG AAGACCAGAT GATCTCCTGG ACCTATATCC AGCCGCTCCC GACCAACATC
GGGAGCTTCA AGGGAGATGT GAAACTCAAG GTCTTAAAGG AGAATCTTGC GGAGATCCAC
CCGGTGGATC TTGCCGATAT CATTGAGGAA CTCGATCACG ACCAGCGGAT GGCGGTCTTT
GCCTCTCTCG ACAATGAACA CGCATCAGAT ACCCTTGAAG AGATCGAACC CAATGTCCAG
CGAGACCTTA TTGCCTCGCT CGACATTGCA AAAGTGGTGC CCCTCATCAG CACCATGACC
CCGGGGCAGG CTGCCGATGT CCTCTCGGCG ATCCCGCACT CGGAGGCTGA GGACATCCTT
GAGGCCCTCA CGCCGGAAAT GACAAAGAAG ATCCGGGCCA TTACCGAGAA GCAGGAAGAG
AAGGTGATCC ACTACACCAC CCAGAAGATC CTCAAATTCC TGCCGGAAAC ACTTGTCGAG
TACGTGCAGA ACGATTATCC TAACCATGCC CGGGGAAAAG ATGTCATCAT GTACATCTAC
GTAGTGGATG CACAAGAGCA CCTGATGGGC GTGGTGGACT TAAAAGAACT CCTTATTGCC
GATGACAAGG CCCCGCTTTC GGCTATCATG TCCGAGAACG TGATCTCGGT AAATGCCGAG
AGCACGCTCA AGGAGGCCTC GCAGGAGTTT GAGCGGTATG GCTTTCGGGC CCTGCCGGTT
ACCGATGACG AAGAGCATCT TATCGGGGCC ATCCCCTACC GCGATGTGAT GGATCTCACC
CATCACCTCC TTGAATAA
|
|---|
| Protein sequence | MTPNETATGA AKAADKEIFL SEILGIPVLS REKKIGTLSD LIIVETAKIP EVKSLYVKRS
FGYPSLIIPW ENVVELGHRV IVDIPALEPF EANPPEDALL LKDYVMDKKV LDLEESEVEV
VYDIRLVHRN KKLYVTDVDT GKSARLRRFG LKTLSRVFSS EEPEDQMISW TYIQPLPTNI
GSFKGDVKLK VLKENLAEIH PVDLADIIEE LDHDQRMAVF ASLDNEHASD TLEEIEPNVQ
RDLIASLDIA KVVPLISTMT PGQAADVLSA IPHSEAEDIL EALTPEMTKK IRAITEKQEE
KVIHYTTQKI LKFLPETLVE YVQNDYPNHA RGKDVIMYIY VVDAQEHLMG VVDLKELLIA
DDKAPLSAIM SENVISVNAE STLKEASQEF ERYGFRALPV TDDEEHLIGA IPYRDVMDLT
HHLLE
|
|---|
| |