Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1432 |
Symbol | |
ID | 5410749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1466481 |
End bp | 1468070 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640868667 |
Product | hypothetical protein |
Protein accession | YP_001404593 |
Protein GI | 154150975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.177306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000115076 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCTATC CCGATCTCAA GAGCGATGAG TCCATTGTCC TGACGGCACA GCATGTGAAG GTCAAATCCG TGCCGTTCGA ACTGGTGCTC ACCAATCGTC GTCTTATAAT TATTGACAGC GAGAAGAATG TAGTTCCGAC CCAGCAGATC ACGCTTTTTT CCATCCGGAA CGTGATGGCG AGCGAGAATG CCATTCGCGA TCCGGTCATC ACGCTGACGA TCCAGACAGA TGCAGCAGAG ACCCGGGAGA TGGCGCTCAC GTTTGTCCGG CAGAGCGCGG GAGAGCGGCG GCGCGAGGCC GATGAATGGG CAAAATCTCT GCGGAAGTAC ATTTCTGAAG CGGCATCACA GCCCGGTGAT TTTGCCACCG GGGCGCCGGC TGCGTTTGAA TCCCGCCCGG ATCACGGGGT CACACCCGGT ATCAAAAAGA AGATCGAGAT TGCCGGGCCC ATCAAGAGGA TTACGGTGGA CACAAGCCAC CTTCCCCCAA AGCCGGTGGA GTCCACCTCG CTTCCCGAGG GATCGTTCTG CGGGCGGTGC GGCAACCGCA TCCCCCCGGG ATCGACCTTC TGCAACCGGT GCGGTACCCG GGTCAACGTA CCCTCAGAAG AAGTGCCGGC TCCTGTTGCG GCGCCCCAGA TTGCCACTGC CCCGGCAGCC ACGGCCGGAG CGGGCGAGCG TAAAATCAGC GGAGGGCGGC CCATAGAACA GATCATCCAC TCGATTGAAC CTTTGATTGA AGATTCCGTC CCCCGCACAG GATCTTCACC GGCGGTTCCC GAGCCGTTTG TCCCGGCACC GGCAACTCGT GAAGCAGAGT CTTCTGTCCC GGCTCCTGAG ACACCAGCGC CGGCCCAGGA GAGTGTCGTC CCCTCTGAAG GAATAGCGCC GGCAGCGACT GCTGCACCCG CTCCTGCAGA AGGTGAGCAG ATCCCGGCCG CCGCCATCCC TCCGGCTCCC CCTATCCCGC CGGTTCCTGC AGCACCCCGT AAAGGCGGCA GGAAGATTCT TGCGGCCGCG ATCATCGTCA TTCTGGTAAT TGCGGTTGTT GCCGGGGGAT TGTTTGTCCT CCCGGCCCTG AACAAGTCTG CTGTCGTGAC CCCGACCCCG ACACCAACAC CTGTTCCCAC TACTGCAACC CCGACCCCGA CACCCACGCC AGTCCCCACT TCTGTCGTCA CCACAGTTGC CGTCACCACT ACCCCGCAAA GCCTTGTTCC CCAGAGCGGG GTCTGGGCCG AAGTCACGTA CGACAATACG TACTCCGGTC AGGTAGGTGT TCCGGGATCC CAGGCCTCGG TCAGTGATAC CGGGGATCAT TTCTACCGTA TTCCGACGGT TGACGGGATC GTGGCAATTA CCCTGAAAAA GACCGATGGA TCGGGAGACG AGCTCAAAGT TGTCCTGTAC AAGGATGGCG CCGTAGTAAC GACAGCATCC ACAAAGGCAC CTTACGGAAC GGTTGATATG CAGTTCTCGC TTCCCGCCGC GTCAACCCCG ACTCCGACTG TTGCCATACT GACGGCAACA CCCACAGCGA CACTTACGGG TTCGAACGCG ACTGCAAACA AGACGGCCTC CTCCTTATGA
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Protein sequence | MGYPDLKSDE SIVLTAQHVK VKSVPFELVL TNRRLIIIDS EKNVVPTQQI TLFSIRNVMA SENAIRDPVI TLTIQTDAAE TREMALTFVR QSAGERRREA DEWAKSLRKY ISEAASQPGD FATGAPAAFE SRPDHGVTPG IKKKIEIAGP IKRITVDTSH LPPKPVESTS LPEGSFCGRC GNRIPPGSTF CNRCGTRVNV PSEEVPAPVA APQIATAPAA TAGAGERKIS GGRPIEQIIH SIEPLIEDSV PRTGSSPAVP EPFVPAPATR EAESSVPAPE TPAPAQESVV PSEGIAPAAT AAPAPAEGEQ IPAAAIPPAP PIPPVPAAPR KGGRKILAAA IIVILVIAVV AGGLFVLPAL NKSAVVTPTP TPTPVPTTAT PTPTPTPVPT SVVTTVAVTT TPQSLVPQSG VWAEVTYDNT YSGQVGVPGS QASVSDTGDH FYRIPTVDGI VAITLKKTDG SGDELKVVLY KDGAVVTTAS TKAPYGTVDM QFSLPAASTP TPTVAILTAT PTATLTGSNA TANKTASSL
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