Gene Mboo_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1432 
Symbol 
ID5410749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1466481 
End bp1468070 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content60% 
IMG OID640868667 
Producthypothetical protein 
Protein accessionYP_001404593 
Protein GI154150975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.177306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000115076 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCTATC CCGATCTCAA GAGCGATGAG TCCATTGTCC TGACGGCACA GCATGTGAAG 
GTCAAATCCG TGCCGTTCGA ACTGGTGCTC ACCAATCGTC GTCTTATAAT TATTGACAGC
GAGAAGAATG TAGTTCCGAC CCAGCAGATC ACGCTTTTTT CCATCCGGAA CGTGATGGCG
AGCGAGAATG CCATTCGCGA TCCGGTCATC ACGCTGACGA TCCAGACAGA TGCAGCAGAG
ACCCGGGAGA TGGCGCTCAC GTTTGTCCGG CAGAGCGCGG GAGAGCGGCG GCGCGAGGCC
GATGAATGGG CAAAATCTCT GCGGAAGTAC ATTTCTGAAG CGGCATCACA GCCCGGTGAT
TTTGCCACCG GGGCGCCGGC TGCGTTTGAA TCCCGCCCGG ATCACGGGGT CACACCCGGT
ATCAAAAAGA AGATCGAGAT TGCCGGGCCC ATCAAGAGGA TTACGGTGGA CACAAGCCAC
CTTCCCCCAA AGCCGGTGGA GTCCACCTCG CTTCCCGAGG GATCGTTCTG CGGGCGGTGC
GGCAACCGCA TCCCCCCGGG ATCGACCTTC TGCAACCGGT GCGGTACCCG GGTCAACGTA
CCCTCAGAAG AAGTGCCGGC TCCTGTTGCG GCGCCCCAGA TTGCCACTGC CCCGGCAGCC
ACGGCCGGAG CGGGCGAGCG TAAAATCAGC GGAGGGCGGC CCATAGAACA GATCATCCAC
TCGATTGAAC CTTTGATTGA AGATTCCGTC CCCCGCACAG GATCTTCACC GGCGGTTCCC
GAGCCGTTTG TCCCGGCACC GGCAACTCGT GAAGCAGAGT CTTCTGTCCC GGCTCCTGAG
ACACCAGCGC CGGCCCAGGA GAGTGTCGTC CCCTCTGAAG GAATAGCGCC GGCAGCGACT
GCTGCACCCG CTCCTGCAGA AGGTGAGCAG ATCCCGGCCG CCGCCATCCC TCCGGCTCCC
CCTATCCCGC CGGTTCCTGC AGCACCCCGT AAAGGCGGCA GGAAGATTCT TGCGGCCGCG
ATCATCGTCA TTCTGGTAAT TGCGGTTGTT GCCGGGGGAT TGTTTGTCCT CCCGGCCCTG
AACAAGTCTG CTGTCGTGAC CCCGACCCCG ACACCAACAC CTGTTCCCAC TACTGCAACC
CCGACCCCGA CACCCACGCC AGTCCCCACT TCTGTCGTCA CCACAGTTGC CGTCACCACT
ACCCCGCAAA GCCTTGTTCC CCAGAGCGGG GTCTGGGCCG AAGTCACGTA CGACAATACG
TACTCCGGTC AGGTAGGTGT TCCGGGATCC CAGGCCTCGG TCAGTGATAC CGGGGATCAT
TTCTACCGTA TTCCGACGGT TGACGGGATC GTGGCAATTA CCCTGAAAAA GACCGATGGA
TCGGGAGACG AGCTCAAAGT TGTCCTGTAC AAGGATGGCG CCGTAGTAAC GACAGCATCC
ACAAAGGCAC CTTACGGAAC GGTTGATATG CAGTTCTCGC TTCCCGCCGC GTCAACCCCG
ACTCCGACTG TTGCCATACT GACGGCAACA CCCACAGCGA CACTTACGGG TTCGAACGCG
ACTGCAAACA AGACGGCCTC CTCCTTATGA
 
Protein sequence
MGYPDLKSDE SIVLTAQHVK VKSVPFELVL TNRRLIIIDS EKNVVPTQQI TLFSIRNVMA 
SENAIRDPVI TLTIQTDAAE TREMALTFVR QSAGERRREA DEWAKSLRKY ISEAASQPGD
FATGAPAAFE SRPDHGVTPG IKKKIEIAGP IKRITVDTSH LPPKPVESTS LPEGSFCGRC
GNRIPPGSTF CNRCGTRVNV PSEEVPAPVA APQIATAPAA TAGAGERKIS GGRPIEQIIH
SIEPLIEDSV PRTGSSPAVP EPFVPAPATR EAESSVPAPE TPAPAQESVV PSEGIAPAAT
AAPAPAEGEQ IPAAAIPPAP PIPPVPAAPR KGGRKILAAA IIVILVIAVV AGGLFVLPAL
NKSAVVTPTP TPTPVPTTAT PTPTPTPVPT SVVTTVAVTT TPQSLVPQSG VWAEVTYDNT
YSGQVGVPGS QASVSDTGDH FYRIPTVDGI VAITLKKTDG SGDELKVVLY KDGAVVTTAS
TKAPYGTVDM QFSLPAASTP TPTVAILTAT PTATLTGSNA TANKTASSL