| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1408 |
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| Symbol | |
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| ID | 5410810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1437934 |
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| End bp | 1439169 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868641 |
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| Product | LOR/SDH bifunctional protein |
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| Protein accession | YP_001404569 |
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| Protein GI | 154150951 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1915] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00300] conserved hypothetical protein TIGR00300 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000543179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.449844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGT CGCAGGAGAT CGAGCTGCAG GGTCATATCA TTGATTCCGG TATTATGACC
CAGCTCTTTG ACCGGGTCAT GGACATGGGG GGAAATTTCG AGATCCTCAC CTTTGACGTC
GGGAAAAAGA AGACCGATCC CAGTTATGCC CGCCTTAAGA TCGTTGCACA GGACAAGGAG
AAACTGCGTT CCATCCTTTC GGAACTTCAT CGCCTCGGTG CACGCCTCCC CCCGGTGCAG
TCCGTCCATT ATGTTCCTGC CGCCAGCAAC CGGAACGCTC CCCGGGAATT TTACACAACC
ACCAACCATC CCACCCAGGT CAGGCTGGCT GACGAATGGG TGACGGTTGA AAACATTGAG
ATGGACTTTC TGATCGTGGT CGATCCGGCA AAGAAGAAAG CCCGGTGCAC GCCCCTTGGG
AAGATCAAAA AAGGCGATCT CGTGGTAGTC GGGGAAGAAG GAGTTCTGGT AAATTACCCC
GAGCGGCCCC GGACAAGCAG TACGTTTGAG TTTATGCATG GCACGGTCTC CTCCGAGCGC
CCCAGCGAGA CCCTGATCGC CCAGATTGCA AAAGAGATCC TCGAAGTCCA CAAAACCGGG
GGGAAAATCA TCCTCGTGGG AGGGCCTGCC ATTATCCATA CCGGCGCTGA TCATGCAGTA
GCGGAGATGA TCCGGAAAGG CTACATCAAT GTCCTCTTTG CGGGAAATGC CCTTGCCACG
CACGATGTCG AGTGCAATCT CTATGGGACG TCCCTTGGTA TGGATATAAA AACCGGGAAA
CCGGTGATGG GGGGACACCG GCACCATCTC TACGCTATCA GTGAGATCAT GCGGGCCGGC
TCGTTAAAAA ATGCAGTGGA CCAGGGCATC CTTACAGGAG GTATCATGTA CGAGTGCGTA
AAGCACGACA TCCCCTTTGT CCTAGCCGGC TCCATACGGG ACGACGGCCC CCTGCCCGAT
GTGATCCAGG ACACGATGGC AGCGCAGGAC GAGATGCGCA AGTACATTCC CGGCTGCAAG
ATGGTCCTGA TGGTAGCAAC CCTCCTGCAC TCGATCGCGG TAGGAAACTG TCTGCCCTCC
AGCGTGAAGA CGGTCTGCGT GGATATCAAC CCCGCCTCTG TCACCAAACT CATGGACCGC
GGCACAACGC AGGCTATCGG TATTGTCTCT GATGCCGGCA CCTTCTTCCC CCTTCTTGCC
GAACAGATCG AGAAGCAGAG CAAAGGGAAA AAATAA
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| Protein sequence | MAESQEIELQ GHIIDSGIMT QLFDRVMDMG GNFEILTFDV GKKKTDPSYA RLKIVAQDKE
KLRSILSELH RLGARLPPVQ SVHYVPAASN RNAPREFYTT TNHPTQVRLA DEWVTVENIE
MDFLIVVDPA KKKARCTPLG KIKKGDLVVV GEEGVLVNYP ERPRTSSTFE FMHGTVSSER
PSETLIAQIA KEILEVHKTG GKIILVGGPA IIHTGADHAV AEMIRKGYIN VLFAGNALAT
HDVECNLYGT SLGMDIKTGK PVMGGHRHHL YAISEIMRAG SLKNAVDQGI LTGGIMYECV
KHDIPFVLAG SIRDDGPLPD VIQDTMAAQD EMRKYIPGCK MVLMVATLLH SIAVGNCLPS
SVKTVCVDIN PASVTKLMDR GTTQAIGIVS DAGTFFPLLA EQIEKQSKGK K
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