| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1395 |
|---|
| Symbol | |
|---|
| ID | 5410957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1427583 |
|---|
| End bp | 1427774 |
|---|
| Gene Length | 192 bp |
|---|
| Protein Length | 63 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640868628 |
|---|
| Product | 30S ribosomal protein S17e |
|---|
| Protein accession | YP_001404556 |
|---|
| Protein GI | 154150938 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1383] Ribosomal protein S17E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.407431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.322807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCA AGCCATCGTA TATCAAAACT ATCGGTACGG CACTCCTTTC CACCCAGAAA
GAGCATTTCA GTAACAACTT CGACGCAAAC AAGCAGCAGC TTGCCAGCTC GGTCTCCGTT
GACAGCAAAA GGGTCAGGAA TCGAATCGCC GGGTATATAA CAAGAAAAAT TAATACAAAA
AGACACCCAT AA
|
|---|
| Protein sequence | MGIKPSYIKT IGTALLSTQK EHFSNNFDAN KQQLASSVSV DSKRVRNRIA GYITRKINTK
RHP
|
|---|
| |