| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1388 |
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| Symbol | |
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| ID | 5412038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1421193 |
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| End bp | 1422374 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868621 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001404549 |
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| Protein GI | 154150931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0811726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.459687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAGC CTGATATTAT CTGTTCGGAC CTTGTCTCTA TGCGGAGTGA AAACCCGCCG
GGCGATACCT CCGGACCCAT AGGATACATC AGGGACTTTC TCACCGACCG GGGCATAAAA
TCGGATATTA TTTGTTCTCC TGGGGGACGT TGCAACCTGG TGACCCGGGG AGATCCCCGT
TCGCTCATGC TCTGCGGGCA TGTGGATGTA GTACCGGCCC TTGAAGAGGG TTGGGAGCGC
CCCCCGTTTT CCGGGGCCAT CGAAGAGGGA TATGTCTGGG GCCGGGGTAC AAGCGATATG
AAAGGCGGTG TCGCTGCCAT CCTCTCTGCC TGCGATACCC TTCTTGAAGC CGGTGAGCCC
CTGCCAGCCA CCCTCCTTTT TGTGTGTGAC GAAGAGACCG GAGGCGAGTA CGGAGTAAGG
CTCCTGCTTG AAAAAGGTCT TCTTCCTCCC TGTGATTGCC TGATTGCCGA ACCCTCTCCT
GCCCTGCATC CCTGCATCGG GCAGAAGGGG CTCTGCCGGC TTGAACTCCG GTTTACCGGG
AAACCCGGCC ATGGGTCCCT GTATCCCCTC GTGGGGAGGA GTGCAGTTAT GGAAGCCGTA
CACCTGCTTG AATATGTCAG GGGTCTTCCC GATCATGTTT TTTCCCTGGA TGAAGATCTC
AGGGACCTGA TCAGGTCTTC GTCAGCAGTC TTTGCCGAAG AGTTCGGGTT AGATAAGGGA
GGGGATATCC TGGAGCGGGT GTCGTTTAAC CCCGGCATAA TAGCCGGAGG GGAGAAGGTC
AACATTGTGG CCCAGCATTG CAATCTCGAT CTTGAACTGC GTATCCCGTG GGGATGCGAT
ATACGGATGC TGGTTGAAGG GATTATGGCT CACGCACCCC ATGCCGCGCT TGTCAGGAAA
GCCCTTCATG AGCCTTCCCT GACCGATCCT CTCTGTGATT TTGTTTCCGT GGTCTGTCGG
GAGGTCAGTG CCGTGCAGGG CAGACCTGCG AGCCCAATCC TCCAGTGGGC GGCAAGCGAT
GCCCGGCACC TGCGTGCAGC GGGATTCCGG GTGATCGAGT ATGGTCCCGG CGATCTAGCC
ACGCTGCATG GGATCAATGA ACGGGTTTCT GTTGCAGCAC TCAAAAAAGC CGCAGAAATT
TATCTGCGGG TTATGCGGGA GTATAGTTCA CACCTGTCCT AA
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| Protein sequence | MMEPDIICSD LVSMRSENPP GDTSGPIGYI RDFLTDRGIK SDIICSPGGR CNLVTRGDPR
SLMLCGHVDV VPALEEGWER PPFSGAIEEG YVWGRGTSDM KGGVAAILSA CDTLLEAGEP
LPATLLFVCD EETGGEYGVR LLLEKGLLPP CDCLIAEPSP ALHPCIGQKG LCRLELRFTG
KPGHGSLYPL VGRSAVMEAV HLLEYVRGLP DHVFSLDEDL RDLIRSSSAV FAEEFGLDKG
GDILERVSFN PGIIAGGEKV NIVAQHCNLD LELRIPWGCD IRMLVEGIMA HAPHAALVRK
ALHEPSLTDP LCDFVSVVCR EVSAVQGRPA SPILQWAASD ARHLRAAGFR VIEYGPGDLA
TLHGINERVS VAALKKAAEI YLRVMREYSS HLS
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