| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1385 |
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| Symbol | |
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| ID | 5412035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1417052 |
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| End bp | 1418971 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868618 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001404546 |
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| Protein GI | 154150928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.741277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.763255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATTG AAGATCGGTT AAAAGAGCTC AGGGATAAGA TCAACGAGCG GGTGCCTTCG
GGAATCCGGG TCACCGAGGT TGAATTTGAA GGGCCCGAAC TTGTGATCTA CACGGATGAT
CCCAAACGGT TTGCCGATGA AGCCGACCTG ATCCGGGTCC TGGCACGCGA TCTGCGCAAG
CGGATCGTTG TCCGTCCCAC TATCCTTGAG GATCCTGAGA AAGCGGCAAA CGAGATCCGG
GCGGTTGTAC CGGATTCCTC AGGTATCACG GATATTTTCT TTGACGCGGA TACCGGGGAA
GTTCTTATCG AGGCAGAAAA ACCCGGTGTA GTTATCGGGA AAAACGGGAT CACGCTGCGC
GAGATCACCA AGCATATAGG CTGGACGCCA AAAGTGGTCC GCACCCCGCC AATTGAAAGT
TCCACGGTCA AGCAGGTCCG GCAGTACCTG CGCTCGGTCA ACGAGGAACG GAAAACGTTT
TTGCGTACCA TCGGGCGCCG GATCCACCGC GATATCCCGG GCCGGGACGA AACCAACAAG
GATGCACCAA GGAAAGACCA GTGGGTCCGG GTCACGACCC TTGGCTGCTG CCGTGAAGTA
GGCCGGGCAG CCTTCCTCTT AACCACCCCT GACAGCCGTG TGCTCATCGA CTGCGGGGAA
AAACCGGACA ATGCCGGCGG GACCCCATAC CTCTATGTCC CCGAGATCCA CCCCCTCGCC
CAGCTCGATG CCGTGGTCCT TACCCATGCC CACCTCGATC ACTGTGCACT CATACCCCTC
CTGTACAAAT ACGGGTACGA GGGCCCGGTA TATTCCACCC CGCCAACCCG GGATCTCTCG
GCGATGCTCC AGCTGGATTA CCTGGATGTC ATCAACAAGG AGGATCGCAA GATCCCCTAC
AGTTCAAATG AGGTCAAGAC CTACATCCGG CACTCGATTA CCCTCAATTA CGGCAGCGTG
ACCGATATCG CCCCTGACAT CAAGCTCACC TTCCATAATG CAGGCCATAT CCTTGGCTCC
GCCATCGCAC ATTTCCACAT CGGAGACGGG CTGTACAACA TCGCATTTAC CGGGGACTTC
AACTACAGCA AAAGCAGGCT TTTTAACCCG GCCATTAACC AGTTCCCGCG CCTCGAAGCC
CTCTTCATGG AGAGCACCTA TGGCGGTTCC AATGATTTCC AGCCGGCACG CTCGGACGCA
GAATTGAAGC TCTACGAGAC AATCAACAAG GTACTCTCGC GGGGCGGCAA AGTGATCATT
CCAGCATTTG CCGTGGGCAG GTCACAGGAA GTCATGCTTG CCCTTGAAGA GGGGATGCGT
CTTGGAAAAA TCCCGCATGT CAAGATCTAC CTCGACGGCA TGATCCGCGA GGCAACAGCC
ATCCATACTA CCTACCCGGA GTACCTCAAC AATGACCTCC GGAACCTGAT ATTCCGGGAG
GGGATGAACC CCTTCCTTGC CGAGTGCTTC CAGCAGGTGG ACTCATCCGA GCTCCGCGAG
AAGGTGATCA ACGGCGATCC GTGCGTTATT ATCTCCACAA GCGGGATGCT CAACGGCGGA
CCGGTCATGG AATACCTCCT TAACCTTGCC GAGGATGAGA AGAATGCGCT CGTCTTTGTC
GGGTACCAGG CTGATGGAAC GCAGGGCAGG CGCATCCAGA AGGGGTGGCG CGAGGTACCC
CTGGGCCGGA AGGGCACGAT CACAATTAAC CTCGAGATTG ACACCATCGA CGGCTTCTCA
GGGCACTCTG ACAGGCGCCA GCTGATGAAC TACATCGGCC AGATCCAGCC CCGGCCCGAG
AAGATCTTCT GTATTCACGG CGATGAGAAC AACACCATCG ATCTTGCCAG TTCCATCTAC
AAACGTTACC ATATCCAGAC GCACTCTCCG ATGAACCTGG AAACGTACCG CATGGTATAA
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| Protein sequence | MLIEDRLKEL RDKINERVPS GIRVTEVEFE GPELVIYTDD PKRFADEADL IRVLARDLRK
RIVVRPTILE DPEKAANEIR AVVPDSSGIT DIFFDADTGE VLIEAEKPGV VIGKNGITLR
EITKHIGWTP KVVRTPPIES STVKQVRQYL RSVNEERKTF LRTIGRRIHR DIPGRDETNK
DAPRKDQWVR VTTLGCCREV GRAAFLLTTP DSRVLIDCGE KPDNAGGTPY LYVPEIHPLA
QLDAVVLTHA HLDHCALIPL LYKYGYEGPV YSTPPTRDLS AMLQLDYLDV INKEDRKIPY
SSNEVKTYIR HSITLNYGSV TDIAPDIKLT FHNAGHILGS AIAHFHIGDG LYNIAFTGDF
NYSKSRLFNP AINQFPRLEA LFMESTYGGS NDFQPARSDA ELKLYETINK VLSRGGKVII
PAFAVGRSQE VMLALEEGMR LGKIPHVKIY LDGMIREATA IHTTYPEYLN NDLRNLIFRE
GMNPFLAECF QQVDSSELRE KVINGDPCVI ISTSGMLNGG PVMEYLLNLA EDEKNALVFV
GYQADGTQGR RIQKGWREVP LGRKGTITIN LEIDTIDGFS GHSDRRQLMN YIGQIQPRPE
KIFCIHGDEN NTIDLASSIY KRYHIQTHSP MNLETYRMV
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