Gene Mboo_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1356 
Symbol 
ID5410602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1381289 
End bp1381990 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID640868588 
Productglutamine amidotransferase class-I 
Protein accessionYP_001404517 
Protein GI154150899 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.269332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0346104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCC TCCTGCATAC ACACATTGTA CGTATGAAGA TCGCCATATT CCAGCATGTT 
GCCAGTGAAC CGGCCGGGTA CTTCGAGACG GTCTTTTTTG AACAGGAGAT CCCGTTCGAG
TACGTCCGGC TGTACGAGAC AAACGAGATC CCCGATGGTG CAAAGAATGC CACCCATCTT
CTCTTCATGG GTGGGCCCAT GAGTGTTAAC GACGAGAGGG AACTGCCCTG GCTTGTTGAA
GAAAAGGCGC TCATCCGCGA CGCGGTAAAG AAAGACCGGC CGGTGCTGGG GATCTGCCTT
GGGGCCCAGC TGATCGCGTC GGCTTTTGGC GCCCGGGTAT ATCCGTACCG TCAGGAGACC
GGCTGGTGTA CGCTCACCCG TACGCCGGAC GCATCCGGCA TATTCTCGCG CTTCCCCCCG
CAGTTCTCGG TTTTCCAGCT CCACGGTGAG ACCTTCGATC TCCCACCCGG CGCCCGCCTG
CTCTGCACCG GTGAAACGAT ACACCACCAG GCATTTGCGT ACAAGACCGC ACTCGGCCTC
CAGTTCCATC TTGAGCTCAC GGATACGATC ATCAGGGAGT GGGTAAAAGA CCTTGACCCG
GGGATCCAGG CAGCGGTCCA AAAAGAAACC CCCCGGTTCC TGGCTGATAG CAACCGGCTC
TGCCGGGTGA TCGCACAGGA TTTTGTTGCA AAAAAGGGCT GA
 
Protein sequence
MCLLLHTHIV RMKIAIFQHV ASEPAGYFET VFFEQEIPFE YVRLYETNEI PDGAKNATHL 
LFMGGPMSVN DERELPWLVE EKALIRDAVK KDRPVLGICL GAQLIASAFG ARVYPYRQET
GWCTLTRTPD ASGIFSRFPP QFSVFQLHGE TFDLPPGARL LCTGETIHHQ AFAYKTALGL
QFHLELTDTI IREWVKDLDP GIQAAVQKET PRFLADSNRL CRVIAQDFVA KKG