Gene Mboo_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1352 
Symbol 
ID5410288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1377787 
End bp1378599 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID640868584 
ProductNAD(+) kinase 
Protein accessionYP_001404513 
Protein GI154150895 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0123507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0209286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCT TTCTTGTTTC CCGTATTGAC ATGCCCGGAG CCCTTGACTG CGCCAGCCGG 
ATGAAAACGG CGCTGGAACG TGCAGGACAT ACTGTGGTTC TTGACCCGGA TACGGCATCA
ATGCTGGGAG GTTCCGGGCA TTCCATAAAC AAGGTTTCCG CAGATATGGC CGTCGTGATT
GGGGGAGACG GCACGATCCT GCGCACCGTG CAGCAGCTGC ACGAACAGAT CCCCATCATC
GGGATCAACC ATGGCGAGGT GGGGTTCCTT GCAGACCTCG AGCCCGAAGA GGCGGGAGCG
TTCGTGCGAT CCCTTGCGCC GGGCTTTGAC GTTGAGGAGC GCATGCGGCT CTCCCTGTGG
AACGAAGAGG ATCACCTGGG CGATGCCCTG AATGAGGGGC TTATTGTCAC CACCCGGCCG
GCAAAGATGC TCCGGTTCTC GATTCTTGTT GACGGAAGAC TCACCGAGCA GTTCCGCTCA
GACGGGATTC TGGTGAGTAC ACCCACCGGA TCGACCGCAT ATGCGATGAG CGCCGGGGGG
CCGATCGTGG ACCCCCGGAT CGAGGGATTC CTCCTTGTCC CGCTCGCCCC GTACCTGCTC
TCGTCCCGTC CCCACCTTAT TTCCAGCAGC CGCAGGCTGG AGATCCGGCT GGAGAGTTCA
AAACCGGCAA AACTGGTTAT TGACGGCCAG AATACCGTGG AACTGGGGAG CGCGGTCTCC
CTTGTAATAC AGAAGGCAGC CAGCCCGGCA CGGTTTATCG ATGTGCACCG GAATTTCTTT
GAGAAGGTGG ACCGCAAACT CCGGAAACTC TAG
 
Protein sequence
MKCFLVSRID MPGALDCASR MKTALERAGH TVVLDPDTAS MLGGSGHSIN KVSADMAVVI 
GGDGTILRTV QQLHEQIPII GINHGEVGFL ADLEPEEAGA FVRSLAPGFD VEERMRLSLW
NEEDHLGDAL NEGLIVTTRP AKMLRFSILV DGRLTEQFRS DGILVSTPTG STAYAMSAGG
PIVDPRIEGF LLVPLAPYLL SSRPHLISSS RRLEIRLESS KPAKLVIDGQ NTVELGSAVS
LVIQKAASPA RFIDVHRNFF EKVDRKLRKL