| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1342 |
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| Symbol | |
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| ID | 5410278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1368857 |
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| End bp | 1370725 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640868574 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001404503 |
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| Protein GI | 154150885 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.136296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.284799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC TTTCCGTTGC CGTCAACCTG CCCTTCAAAC CCGAACCGGT AGATCTGGAT
GTGGATCTGT ACGCCAACCT TGAATCGGAT GCGCTTTTCA AGATGCTGCC GGCAAATGCA
AAGGAGTACG TGCAGAACAG CCCTCATCTC CTTGAGTACC TTCACACCTT TCCGGTAAAC
ACGTACGGTA TTCCGCTCTT TTTGTCTGAG TTAAAAAAGG ATGTCCGGTC CATGAAAAAT
CCCAACATTA TCTATCCGGT CAACGATACT ACGTTTGTGC ACATTCTGCC GGACCCGGAT
GATGTGAGAA ACTTCTATAT CCCTATCGAG CCCTCATTCC TGCATTCTGT CAGTGATATC
CTGCCGGTCA TTGAGACCAA ACTTATCGAC CTCATTGATG GCCTTGATAC GGATCCGACT
ACGGATAAGG AAAGGACCGA AGTTATCAAA AAGATGCTCT CTTCAATTGC GGTAATTAAG
CCCCCTGGCG TAGACATCGC GAGTATATCC GGGGGAGAGG GAAAACCGCA GGGGGGAGCA
TCCAAACTGG TAAAATTCCT CAACACGGAT TTTACCGCGC AGAATAAGAT GAAATCCAAC
AAAAAGTCCA AGAATCTCCC TCTTACTCCT GACGGTAGAA TTATCCTTTC CAACGTGGAA
TACAAGGCGA TCGAGTATCT TCTTGTCCGG GACAAGATTG ATATGGGCGT GTTAAAACCG
TTCCTCTCCG ACTCTTATAT CGAGGATATC TCCTGCGATG GTGTCGGACC AATCTTTATT
GAGCATAAAG TGTTTAAAGG ACTCAAATCG GTTATTGAGT TCAAGGTTTC GCGCGAACTC
GATGAATTCG TGGTCAAGGT TGCAGAGCGG ATAAAGCGGC CCATTACGTA CCGCAGTCCC
GTGGTCGATG CCACGCTTCC AGACGGTTCA CGTATCAACA TCGTGTACGG GACGGAGATC
AGTAAGCACG GCAGCAACTT CACCATACGA AAGGTAAACG AGGTGCCGCT CTCCATTCTC
AACATTGTTG AGAGCAATGG CATTGATTAC ATGTCTGCGG CGTATCTCTG GATCTGTGTC
GAGTACGGCA TGTCTCTTTT CGTGAGTGGT GAGACAGCGA GTGGCAAGAC CACGCTTTTG
AATGCGATTA CCACGTTTAT CCCCCCGGAG AACAAGATTG TAACCATAGA AGATACACCA
GAGCTCACCG TTCCGCACAG GAACTGGATA CGTGAGGTGG CACTTGCCAA AGGTAAAGGA
GAAGGGGACG GCGCGGGAGG CGGGGTTACG ATGTTCGATC TCCTCAAGGC CGCACTCCGT
CAGCGACCCA ACCAGATCCT TGTCGGTGAA ATCCGTGGTG TCGAGGGCGC TGTGGCATTT
GGCGCTATGC AGACGGGCCA CCCCGTGATG AGTACCTTCC ACGCGGCATC TGTGGAGAAA
CTTATCCAGC GTCTCTGCGG GGACCCTATT AATATCCCAA AAACGTACGT GGACAACCTC
AATCTGGTGA TTATCCAGAG CGCAGTTAAG AGACCGGACG GGCAGCTTGT CCGCCGGATG
ATCAGTTGTA ACGAACTGGT AGGATACAAT GCAGAGACCG GGGGATTTAC GTTTGTCCAG
ATGTTCACCT GGGAACCGGT TTCCGATACC TTCATCTGGA CCGGCAAGGG CAGCTCATTC
CTGCTCGAGA ATAAAATTGC GACAATGCTT GGTATCCCGG ACAGCAGGAA AGCCGAGATC
TATCTTGAGG TGGAGAAACG CGCCAAAATT CTCGAACGCC TGCATAAAGC CGGATATGTG
AAATTCTGGG ATCTTTTCCA TATGATGACT AAGATCAAGA AACAGGGCCT CCTTAGCATT
GGTTCGTAA
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| Protein sequence | MSTLSVAVNL PFKPEPVDLD VDLYANLESD ALFKMLPANA KEYVQNSPHL LEYLHTFPVN
TYGIPLFLSE LKKDVRSMKN PNIIYPVNDT TFVHILPDPD DVRNFYIPIE PSFLHSVSDI
LPVIETKLID LIDGLDTDPT TDKERTEVIK KMLSSIAVIK PPGVDIASIS GGEGKPQGGA
SKLVKFLNTD FTAQNKMKSN KKSKNLPLTP DGRIILSNVE YKAIEYLLVR DKIDMGVLKP
FLSDSYIEDI SCDGVGPIFI EHKVFKGLKS VIEFKVSREL DEFVVKVAER IKRPITYRSP
VVDATLPDGS RINIVYGTEI SKHGSNFTIR KVNEVPLSIL NIVESNGIDY MSAAYLWICV
EYGMSLFVSG ETASGKTTLL NAITTFIPPE NKIVTIEDTP ELTVPHRNWI REVALAKGKG
EGDGAGGGVT MFDLLKAALR QRPNQILVGE IRGVEGAVAF GAMQTGHPVM STFHAASVEK
LIQRLCGDPI NIPKTYVDNL NLVIIQSAVK RPDGQLVRRM ISCNELVGYN AETGGFTFVQ
MFTWEPVSDT FIWTGKGSSF LLENKIATML GIPDSRKAEI YLEVEKRAKI LERLHKAGYV
KFWDLFHMMT KIKKQGLLSI GS
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