Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1330 |
Symbol | |
ID | 5411597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1355151 |
End bp | 1357046 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868562 |
Product | hypothetical protein |
Protein accession | YP_001404491 |
Protein GI | 154150873 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.507535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAG CACAGGGGAT GAGCGGGATC GATGTACGGG CGGTCACGTA CGAGCTTGCC GGAAAGCAGC CGCTCTGGAT CGACAAGGTG TATCAGTTTG ATTCCCGCAC GCTTGGTATC CGCTTAAACG GGGAGGCGCA TGCGAAGTAC CTGCTGCTCA TCGAGGCCGG GCGTCGGGCA CACCTGGTAA AAAATGCTCC CGAGCCGCCC AAGAATCCCC CGCAGTTTGC CATGTTCCTG CGCAAGTACC TGACGGGAGG TAAGGTGCTT GCGATCCGCC AGCACGGTCT GGAACGGATT CTCATTTTCG ATATCGGGAA GGGTGCGCTT ACCTACCGGC TCATCATTGA GCTCTTTGAC GAGGGAAATG TGATCCTTGC CGATGAAGCA TACCGGATCA TCAAACCGCT TCGCCACCAC CGGTTCAAGG ACCGGGATAT TGTTCCCGAT GCGGTTTACG CAACGAGTGG CACTGACCCG ACCGGCTCCC GGGAGAACCT TGCGGCAGTT CTCGCCGGAG ATGAGCGCGA CCTGGTACGG GCGCTTGCGA TTGCCTGCAT GCTGGGCGGT ACGTATGCCG AATGGGTCTG CAGGACTGCC GGCGCGGATA AGGCCATGCC TGCCGCACAG GCAGATCCAG CCCTGCTCTT TGATGCGGTG ACCTCACTCT TTGACCGGGT GGAGCACCAT GTGCACCCGG TGATCTCCAA ATCAAGCTGC GAGCCGGTGG TGCTTGCTGA AAATGCCCCG CAGGATGAGA ACCAGTTTGC CGGGTTCTCT GACGCGCTCG AAGTCTTTTA CCCGATGACT AAAGCCGAGA AGGTAAAGGT GGCAGCGAGG CCCAAACTAT CAGAAGGGGA GCGGATCCGG AAGTACCAGG AGGCCGCGAT CAAAAAGTTC GACGAGAAGG TCGCAAAGGC CGAGGAGGTT GTGGCAGCGA TCTACGAGAA CTATCCGTTT ATCTCTCAGG TAATCACCTC CCTTGCCGCC GCAAGTAAAC GCCTTTCCTG GCAGGAAATT GAACATCATC TTAAAGATAC CTCATCGACC GATGCAAAAC GGATCACCGC CTTTTTCCCC GGTGAGGCCG CAGTCGAGGT TGATATCGGC AAAAAGGTAA AGATCTTTGT CCACGAGACT GTTGAGCAGA ACGCCGGGCA CTACTACGAC CAGATCAAGA AGTTCAAAAA GAAAAAAGAA GGCGCCCTCC TTGCGATGAA AACGGTAAAA CCCCGGAAGA AGGTGATCCG CCACGATATC GTCCCGATGA AAAAACTCTG GTACCACCGG TTCCGGTGGT TTATCACCAG TGACGGCGTG GTAGTGCTGG GCGGCCGGGA CGCCGGGCAG AACGAGGAAC TGGTCAAGAA GTACATGACC GGCGGCGATC TCTTTGTCCA TGCGGACGTA CATGGGGCAA GTGTGGTGAT CGTCAAAGGT AAAACGGAAA AAATGGATGA GGTGGCGCAG TTTGCCGCAT CGTACTCGGG TGCCTGGAGG AGTGGGCATT TTACGGCAGA TGTATTCAGC GCACAGCCAA CTCAGGTCAG CAAGACCCCG CAGGCCGGCG AATTTGTTGC CCGGGGATCG TTTATCGTCC GGGGGGAGCG CACCTATTAC CGCGATGTCC CTCTGTCTGT CGGGATAGGC CTTGTGCTGG AGCCATATGC GGCCGTGATC GGGGGGCCAC CGGCCGTGAT CCGCTCGCGG ACAAAGACCT TTGCCGAGTT AAAGCCCGGC CGGTTCGAGC CAAACGATGT GGCAAAGAAG GTGCTTCGCC AGCTGCGCGA GAAGATAACA CCTGAAGAGG AGAAACTGCT CAAAGGGATC CTCAATACCG AATCTGTTGC CGCATTTGTC CCGCCGGGTG GATCCGATAT AGCAGGGACG CCATGA
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Protein sequence | MATAQGMSGI DVRAVTYELA GKQPLWIDKV YQFDSRTLGI RLNGEAHAKY LLLIEAGRRA HLVKNAPEPP KNPPQFAMFL RKYLTGGKVL AIRQHGLERI LIFDIGKGAL TYRLIIELFD EGNVILADEA YRIIKPLRHH RFKDRDIVPD AVYATSGTDP TGSRENLAAV LAGDERDLVR ALAIACMLGG TYAEWVCRTA GADKAMPAAQ ADPALLFDAV TSLFDRVEHH VHPVISKSSC EPVVLAENAP QDENQFAGFS DALEVFYPMT KAEKVKVAAR PKLSEGERIR KYQEAAIKKF DEKVAKAEEV VAAIYENYPF ISQVITSLAA ASKRLSWQEI EHHLKDTSST DAKRITAFFP GEAAVEVDIG KKVKIFVHET VEQNAGHYYD QIKKFKKKKE GALLAMKTVK PRKKVIRHDI VPMKKLWYHR FRWFITSDGV VVLGGRDAGQ NEELVKKYMT GGDLFVHADV HGASVVIVKG KTEKMDEVAQ FAASYSGAWR SGHFTADVFS AQPTQVSKTP QAGEFVARGS FIVRGERTYY RDVPLSVGIG LVLEPYAAVI GGPPAVIRSR TKTFAELKPG RFEPNDVAKK VLRQLREKIT PEEEKLLKGI LNTESVAAFV PPGGSDIAGT P
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