Gene Mboo_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1327 
Symbol 
ID5411786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1351858 
End bp1352535 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID640868559 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_001404488 
Protein GI154150870 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.46763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAA AAGAAGGAGA TTTTGTAAAA CTCAGTTATA CGGGCAGCGC AAACGGTATT 
GTTTTCGATA CCACCGATGA GGCTGTAGCA AAGAAGGCAG ATATCCACAG CCCGTCCGCG
ATCTATGGCC CGGTCACAAT CTGCATTGGC CAAAAGCACG TGATCACCGG CCTTGACGAG
GAACTGGTAG GAAAGAAGGT AGGTACCGAG GCTGATGTCA CCGTCCCACC GGAAAAGGCC
TTTGGGGAGC GCGACCCGAA AAAGGTCCAG TCATTCCCCA AGAGCAAGTT CCAGGAAAAG
CCCGTCCGCG GGATGCGCAT CTCTGTTGAG GAGCACGGCG AAGGTGTAGT TGTTGATGTG
ATCGGCTCCC GGGTTCTCGT TGACTTCAAC GCCCCCCTTG CCGGCCAGAC CCTCACGTAT
CACTACAAGA TTGAGGAAGA AGTCACCGAT CCGCTGGAGC AGCTCAAGGG GATTATCCGG
CTCTATGCGG GGAAGGACAT GGAGGCTTCG CTTGATGAGG GCAAGGCCAC CATCACCCTC
CCCCCTGGCA TCAACTACGA TCGGCGCTGG CTTCTCTGGC GCGGCCGGAT CATTCACGAA
GGCTTCGAGA GTGTTAAGGG GATTAACGAG ATCACGCTCG TTGAGACCTA CAAGAAGCCG
GAAAAGAGGG AAGAATAA
 
Protein sequence
MTIKEGDFVK LSYTGSANGI VFDTTDEAVA KKADIHSPSA IYGPVTICIG QKHVITGLDE 
ELVGKKVGTE ADVTVPPEKA FGERDPKKVQ SFPKSKFQEK PVRGMRISVE EHGEGVVVDV
IGSRVLVDFN APLAGQTLTY HYKIEEEVTD PLEQLKGIIR LYAGKDMEAS LDEGKATITL
PPGINYDRRW LLWRGRIIHE GFESVKGINE ITLVETYKKP EKREE