Gene Mboo_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1304 
Symbol 
ID5412062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1327826 
End bp1328353 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content55% 
IMG OID640868535 
Producthypothetical protein 
Protein accessionYP_001404465 
Protein GI154150847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0039184 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0653972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAA AAGACATTGC CATTGTCGGT ATCCTGCTTG CCATCGGGGC TATCCTGCGG 
TATTTCCTTG CCATGCTCCA TACCCCGCTG ACGCCCAACA TGATCATTGC GTTCTACTGC
CTTGCGATCA TCCTGGTCCG TCCAAGAGTA TACGAGGCCC TCGGAATAGG TATCGTGGCC
GGCCTTCTCT CGATGCTGAT ATCCAGTTCC ATATTCCCCC CGGCAAACCT GATAAGCGAA
CCGCTGGGTG CCCTCTCCTG CTTTGGCCTG TACGCGCTCC TCTCGTCCCG GACAAAGTTT
GCCCCGACTG TCACCACCTT CCTTGCAACG CTCGTGAGCG GCTTTTCCTT TGCGGCTGTT
GCGATCATCT GCGTTGCTGC CACCATCCTT TCCACGTTCA ATGGCAGTCT CGGCGCATTT
GTCGTGGTCT TTGTCCCGAT CGTGGTTATA ACGGCAGTGT TTAATGCGAT TATCGTTCAG
ATCCTCTACC TCCCCGCGAG CCGGGTGCTT GTACGAGGAT CCGAATGA
 
Protein sequence
MKSKDIAIVG ILLAIGAILR YFLAMLHTPL TPNMIIAFYC LAIILVRPRV YEALGIGIVA 
GLLSMLISSS IFPPANLISE PLGALSCFGL YALLSSRTKF APTVTTFLAT LVSGFSFAAV
AIICVAATIL STFNGSLGAF VVVFVPIVVI TAVFNAIIVQ ILYLPASRVL VRGSE