Gene Mboo_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1294 
Symbol 
ID5412052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1316441 
End bp1316749 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content50% 
IMG OID640868523 
Productcobalt transport protein CbiN 
Protein accessionYP_001404455 
Protein GI154150837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1930] ABC-type cobalt transport system, periplasmic component 
TIGRFAM ID[TIGR01165] cobalt transport protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00272404 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0249047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG GATTCTTCAA AAAATACAAA CTCGAGATCA TCTTCATTGT GTTTATCGTT 
GCATTCGCAG TTCTATTCCT TTACGAGCAG AATACCCAGG CCCAGGCAAA ATGGGAGGGA
TCGGACGATC AGGGCAGTGC AGCCATTGAG GCAACAGGAT ACACACCGTG GATTCAGCCG
CTCTGGACCC CGCCCAGTTC CGAGGTTGAG TCGCTGCTCT TCAGTATTCA GTCCGGCCTT
GGGGCATTTG TAATAGGGTA CTTCTTCGGA TTTTACCGGG GAAAACGGGA TAGTGGGAAC
CAAGCGTAA
 
Protein sequence
MIPGFFKKYK LEIIFIVFIV AFAVLFLYEQ NTQAQAKWEG SDDQGSAAIE ATGYTPWIQP 
LWTPPSSEVE SLLFSIQSGL GAFVIGYFFG FYRGKRDSGN QA