Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1256 |
Symbol | aroK |
ID | 5412085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1279439 |
End bp | 1279939 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640868484 |
Product | shikimate kinase |
Protein accession | YP_001404417 |
Protein GI | 154150799 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA TTATCCTTAT CGGTTTGCCA GGCGCAGGAA AAAGCACCAC GGGCGTGATC CTGGCAAAGA CGCTCGGTAT GGGCTTTATC GATACTGACA TTCTGGTACA GGATCGTGCC GGCAGGATCC TCCAGGAAAT CCTTGACTAT GAAGGCCCCG TCGCATTCCT GACAACTGAG GAAAAAGCAA TCATCTCCTT AAACTGCACC GGTACGGTCA TTGCCACGGG AGGCAGTGTG GTCATGAGCC CAAAGGCAAT AGCACACCTG AAAAAGACGG GCGTGATCGT GTACCTGGAG CTCTCTTTTG CCGCAATGAA ACGGCGCCTT GCAAACATCA CAAACCGGGG TATTGTCCTC CTTCCTGGGC AAACCCTCCG CCATATGTTT GATCAGCGGG TGCCACTGTA CGAGAACTAT GCCGATCTTA CCGTCCGCTG TTCAAAGAAG GATGCCGAAT CTGTTGTACA GGAGATTGTG ACAGGTTTCC AGACAGGATA A
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Protein sequence | MKNIILIGLP GAGKSTTGVI LAKTLGMGFI DTDILVQDRA GRILQEILDY EGPVAFLTTE EKAIISLNCT GTVIATGGSV VMSPKAIAHL KKTGVIVYLE LSFAAMKRRL ANITNRGIVL LPGQTLRHMF DQRVPLYENY ADLTVRCSKK DAESVVQEIV TGFQTG
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