Gene Mboo_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1256 
SymbolaroK 
ID5412085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1279439 
End bp1279939 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content51% 
IMG OID640868484 
Productshikimate kinase 
Protein accessionYP_001404417 
Protein GI154150799 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TTATCCTTAT CGGTTTGCCA GGCGCAGGAA AAAGCACCAC GGGCGTGATC 
CTGGCAAAGA CGCTCGGTAT GGGCTTTATC GATACTGACA TTCTGGTACA GGATCGTGCC
GGCAGGATCC TCCAGGAAAT CCTTGACTAT GAAGGCCCCG TCGCATTCCT GACAACTGAG
GAAAAAGCAA TCATCTCCTT AAACTGCACC GGTACGGTCA TTGCCACGGG AGGCAGTGTG
GTCATGAGCC CAAAGGCAAT AGCACACCTG AAAAAGACGG GCGTGATCGT GTACCTGGAG
CTCTCTTTTG CCGCAATGAA ACGGCGCCTT GCAAACATCA CAAACCGGGG TATTGTCCTC
CTTCCTGGGC AAACCCTCCG CCATATGTTT GATCAGCGGG TGCCACTGTA CGAGAACTAT
GCCGATCTTA CCGTCCGCTG TTCAAAGAAG GATGCCGAAT CTGTTGTACA GGAGATTGTG
ACAGGTTTCC AGACAGGATA A
 
Protein sequence
MKNIILIGLP GAGKSTTGVI LAKTLGMGFI DTDILVQDRA GRILQEILDY EGPVAFLTTE 
EKAIISLNCT GTVIATGGSV VMSPKAIAHL KKTGVIVYLE LSFAAMKRRL ANITNRGIVL
LPGQTLRHMF DQRVPLYENY ADLTVRCSKK DAESVVQEIV TGFQTG