Gene Mboo_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1227 
Symbol 
ID5411906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1247305 
End bp1248177 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content57% 
IMG OID640868454 
Productcobalamin biosynthesis protein CbiG 
Protein accessionYP_001404388 
Protein GI154150770 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.382267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACT CGGTTGTGAT CGCCCTGGCC CGCTTCCTGC CTGATGCCCG GCGGATTGCG 
GCACTCCTTG ATGCGGATGT TATGGAGTAC CGGGCCGAAA TCTTTGCCGA GGTTTTTCCC
AAAGCCCGGC GGATTGTTGC GCTGATGTCC ATGGGCATCG CGGTCCGGGG CATTGCTCCC
CTGCTTTCGG ACAAGTGGAC CGACCCGGCT GTTGTTGTGG TCACACCGGA TTTTTCCTAT
GCAGTACCTC TGCTTGGTGG CCACCATGGG GCAAATGCCC TTGCAAAGGA ACTTGAAGCA
CTGGGGCTTA TCCCGGTCAT CTCAACGGCC ACTGAGGCTA CCGGGCATGA TTCGGTGGAG
GGAATTGCAG AGCGTGAGGG TCGCGATATC GTGAACCACG ACTCCACACG GGCGGTCAAT
GCGGGGATCC TTGACGGGAA TACCAAGGTG TATTCTGTTC CCGGGCCCGG GATCGTTCTT
GCCGGCCCGG ATGTCTCCAT ACTTATCCGC CGGGGCACGT ATGCAGTCGG GATCGGCTGC
CGGAAGGGCG TGACTGAAGC CGAAGTGACC CGGGCGATAA ACGGGGCTTT TGCAGAAGCG
GGAATACAAA AAGATGAGGT CATGCTCTTT GCAACGACCG CAAAGAAATG CAGCGAGACC
GGGCTCATCG ACGCTGTTGC CTCAATCCCA GCCCCTTTAA TATTCCTTGA CGATGACACT
ATTAACGCGC AGGTGCCCCG GACTCCATCG AAGGCAAAGA GGCTCGGTTT AATCGGCGTT
GCCGAACCCT GTGCACTTGC TGTCTCAAAG CACCGGGAAC TGATTATGAA CAAGAAAGTT
TTTTCAAAGG TGACCATTGC CATTGCCCGC TGA
 
Protein sequence
MTDSVVIALA RFLPDARRIA ALLDADVMEY RAEIFAEVFP KARRIVALMS MGIAVRGIAP 
LLSDKWTDPA VVVVTPDFSY AVPLLGGHHG ANALAKELEA LGLIPVISTA TEATGHDSVE
GIAEREGRDI VNHDSTRAVN AGILDGNTKV YSVPGPGIVL AGPDVSILIR RGTYAVGIGC
RKGVTEAEVT RAINGAFAEA GIQKDEVMLF ATTAKKCSET GLIDAVASIP APLIFLDDDT
INAQVPRTPS KAKRLGLIGV AEPCALAVSK HRELIMNKKV FSKVTIAIAR