Gene Mboo_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1126 
Symbol 
ID5411432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1130664 
End bp1131605 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content56% 
IMG OID640868352 
Productformate hydrogenlyase subunit 4 
Protein accessionYP_001404287 
Protein GI154150669 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.519574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG ATTTCTTCTT GTACGGGATC ATCAATACCC TCTGTGTTGT CCTTGTCGCC 
CCGCTCTTTG TGAGCGTGGT AAAGAAAGTC AAGGCGTGGA CACAGGGGAG GCAGGGCCCG
TCGGTCTTCC AGACCTATTA CACCATAGCA AAACTGCTCA AAAAAGAGGT GATCTATTCC
CCGGATGCCT CGCGGATCAG CCGGGTCACG CCATGGGTCT GCATGGTGGC TATCCTTGTT
GCCTCGCTCT TTGTCCCGCT TGTCTACGTC ACGGCACCGG TCGGGGGGAT TGGCAATATC
ATCCTCTTTT TGTACCTGCT CGTGCTTGCC CGGTTCTTCA TGGCCCTTGC CGGGCTGGAC
GCGGGAAGCA CGTTTGGCGG GATGGGCAGT TCACGGGAGA TGAGCATTGC CGCGGTCATC
GAACCCACCA CAATCATCGT CTTTGCCGCG CTCGCGTTTG TCTTTAAGTC CCTCAATATT
ATCGACATGG CAGGGATTGC TGCCACCACC GGTACACCGG TAACCCCGGT GCTCATCCTC
CTTGGGATCT CGCTTTTCAT CATCCTGATC GTGGAGACCG CACGGATCCC GGTGGACAAT
CCCGAGACCC ATCTTGAACT CACCATGATC CATGAGGGCA TGATCCTGGA GCAGTCCGGA
AAGAACCTTG CCCTGATGGA GTACTCCGCG GCAATAAAGC AGGTCGTGCT CATGGCTCTG
CTCATCAACC TGGTCATTCC GTGGGGAATT GCAACCACAC TTGCTCCCGC AGCTCTCGCA
GCAGCAGCCG TCCTCTTTGT CGCAAAAGGG CTTGTCCTTG CGCTGGTGAT CGGCCTGTTT
GAATCCTCCA TGGCGAAAAT GCGGTTCTTC CGCCTGCCCG GCCTCTTTGT GATGGCGTTT
TTCTTCTCTA CGCTTATTAT CATTGTCGAG GTGTTCGCAT GA
 
Protein sequence
MSFDFFLYGI INTLCVVLVA PLFVSVVKKV KAWTQGRQGP SVFQTYYTIA KLLKKEVIYS 
PDASRISRVT PWVCMVAILV ASLFVPLVYV TAPVGGIGNI ILFLYLLVLA RFFMALAGLD
AGSTFGGMGS SREMSIAAVI EPTTIIVFAA LAFVFKSLNI IDMAGIAATT GTPVTPVLIL
LGISLFIILI VETARIPVDN PETHLELTMI HEGMILEQSG KNLALMEYSA AIKQVVLMAL
LINLVIPWGI ATTLAPAALA AAAVLFVAKG LVLALVIGLF ESSMAKMRFF RLPGLFVMAF
FFSTLIIIVE VFA