| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1123 |
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| Symbol | |
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| ID | 5411367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1126917 |
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| End bp | 1128497 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868349 |
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| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
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| Protein accession | YP_001404284 |
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| Protein GI | 154150666 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.165135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGAA AAGATACCGG TGCAGCAGCC ACGGCAGCGC AGGAGATCTT TGGCAGCGGT
ATCTCCGGCC GGCTCGCGTA CGGGAGCAGC AGGGAATGTA TCCTTGACGT GAATGCAGAC
GAACTTGACC GGGCCGTCCC CGGCCTTGCA GCCCGGAACT TTGTCCTGTC CGCACTCTTT
GCCACTCCCG TGTACGCCGG CGAGGGGTAC ATACTCCGGT ACGTCTTTTC GCATGCCGGG
AGCATCCTTG TCCTCTCCCG GGCCCTCAAC AGAAAACAGG CAACATCCAT TGCCACGATC
TTTCCCTCGG CCACATGGCC GGAGCGGGAG TGCAGGGATA TGTACGGGAT TAAATTTGAA
GGCGCATTCG ATACACGGCG CCTGGTCCTG CATGAGACCT GCCCGGCCGG GTTTTACCCC
TTAGAAAAAT CCGTTAAAAA CGCACCCGTT GCAACCAAAA AAACCGTTCC CCCGGCCGAA
GAGTACCCGT TCCGGACCGT GAGCGGTGAC GGGGTGTACC AGGTGCCGGT GGGGCCGGTC
CATGCCGGCA TCATCGAACC GGGCCATTTC CGGTTCAGCG TGATCGGCGA GACCGTTTTC
AACCTCGAGA TCCGCCTCTT CTATACCCAC CGGGGCATCG AAAAACTTGC CGAAGGAAAA
GACCCGGCAG CATGCGTACG GGTTGCCGAA GCGGTAAGCG GGGACGAGTC GGCGGCAAAT
GCCACCGGCC TGTGCATGGC AATAGAACGG CTCTCCGGGA TAACCGTGCC GGACCGGGCA
TGGCACATCA GGACGGTCCT GTGCGAATCG GAACGGATCT GCTCGCACCT CGGCGATCTC
TCCGGCATGC TGACCGATGT GGCATTTGCC CTTGGGGCCA GCCACTTTGC CGTACTGCGC
GAAGAGTTCT TCCGCGAGCA GGAGAAACTT TCCGGCTCCC GCTTCCTCCG GGGCATGATC
CTGCCGGGAG GAATCAGCCG GGACATTCCT GTCGAAACCC TTGCCCGGTA CCGTGAATTC
CTTGCCCGGT TTGCAAAAGA GTTCCGGGCC GGCCTTGCGA TCGTGCTCTC CACCCCCTCC
GTGATCGACA GGTTTACGCA GACCGGAATT ATCAGAAAAC CGCTCCTGGG CCCGCTCAAC
ATCACCGGCC CGGTTGCCCG GGCCTCGGGC AGCGGGCGGG ACGTCCGGGT GGACAGCCCC
TATGGGATGT ACGACCGTTT CATACCCGTG CCCCATCCCT TAAATGACGG GGATGTCCTT
GCCCGGTTCA CGGTCAAGGC TGCTGAAGTC CTTGACTCCC TTTCCCTGAT CGAAAAAGTG
ATTGCAGGAA TGCCGGAAGG CCCGGTCATA AGCGCGGACG GGGTCGGTGA CGGGGCGGCA
CTTGCACTCG TGGAGGGGCC GCGGGGAGAG AACCTCTGCT GGGTGGAGAT CAGGGAGGGC
AGGGTTTTCC GGTATAAGGT AAGGACGGCA TCGTACTGCA ACTGGCTGGC CATAGAACAT
GCAGCGCCGG GCAATATCAT CGCGGATTTC CCGGTCATCA ACAAGAGCCT GAACCTCTCG
TACGCGGGAA CGGACCTGTG A
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| Protein sequence | MTGKDTGAAA TAAQEIFGSG ISGRLAYGSS RECILDVNAD ELDRAVPGLA ARNFVLSALF
ATPVYAGEGY ILRYVFSHAG SILVLSRALN RKQATSIATI FPSATWPERE CRDMYGIKFE
GAFDTRRLVL HETCPAGFYP LEKSVKNAPV ATKKTVPPAE EYPFRTVSGD GVYQVPVGPV
HAGIIEPGHF RFSVIGETVF NLEIRLFYTH RGIEKLAEGK DPAACVRVAE AVSGDESAAN
ATGLCMAIER LSGITVPDRA WHIRTVLCES ERICSHLGDL SGMLTDVAFA LGASHFAVLR
EEFFREQEKL SGSRFLRGMI LPGGISRDIP VETLARYREF LARFAKEFRA GLAIVLSTPS
VIDRFTQTGI IRKPLLGPLN ITGPVARASG SGRDVRVDSP YGMYDRFIPV PHPLNDGDVL
ARFTVKAAEV LDSLSLIEKV IAGMPEGPVI SADGVGDGAA LALVEGPRGE NLCWVEIREG
RVFRYKVRTA SYCNWLAIEH AAPGNIIADF PVINKSLNLS YAGTDL
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