Gene Mboo_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1081 
Symbol 
ID5411686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1071455 
End bp1071832 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID640868307 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001404242 
Protein GI154150624 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.124143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCT CGTCCCCGGT CGGCACATGC CCGATCCAGA TCTCGCTCTC TGTTATCGGT 
GGAAAGTGGA AGCCGATTAT CCTCTGGTTT CTCAAAGACG AACCGGTCAG GTTTTCCGGG
ATCCAGAAAA AGATCCCGGG GATTACCCAG ATGATGCTTG CAAAACAGCT CAGGGAGCTT
GTGGCCGACG GGATGATCGA ACGGACGGTC TATCCCGAGG TCCCTCCACG GGTCGATTAC
GCCATCACGG ATGATGGCCG TTCGGCCCTT CCCGTTCTTG TGGCATTGAA TGAATGGGGC
AATGAGTACC AGAAACGGAA GTACGGGAAC TGGAGCCAGA AATGTGCGGA CACGTTTCGT
GACGACCCGG AAGAATAG
 
Protein sequence
MPRSSPVGTC PIQISLSVIG GKWKPIILWF LKDEPVRFSG IQKKIPGITQ MMLAKQLREL 
VADGMIERTV YPEVPPRVDY AITDDGRSAL PVLVALNEWG NEYQKRKYGN WSQKCADTFR
DDPEE