Gene Mboo_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1014 
Symbol 
ID5411750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp994545 
End bp995117 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content56% 
IMG OID640868240 
Productisochorismatase hydrolase 
Protein accessionYP_001404175 
Protein GI154150557 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.584957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC TCAGTCTTCC CAAAAAAACA ACCGCACTTG TCGTTATCGA TCTCCAGAAA 
GGAATTGCCG CCCGGCCTAC AGAGCCTCAT TCTGCAGCAG ATGTCATAAG AAACGCCGCC
CGGCTGGTTC AGGCATTCCG GAAAAATGCC ATGCCGGTCT TCCTGGTGCA CGTGGTCTCG
ACACCGGAGA CCATGCTTGC GGTAACAAGC GATACAACCT TTTCCCGGCC CGGGACCATG
CCCCCGGACT GGTCGGAATT TGTCCCGGAG ATCGCGCCTG TTCCCACTGA TGTGATAATA
GGAAAGAAAC AGTGGGGTGC ATTCTACGGC ACGGATCTCG AACTCCAGCT CAGGCGGAGA
GGAATGGATA CGATCGTGCT GTGCGGGATC GCCACCGATT ACGGTGTGGA AAGCACGGCA
CGCTTTGCCT ACGAGTACGG CTTTGAGCAG GTATTTTCTG AGGATGCGAT GGCCTCGATG
ACCGCAGAGC AGCACCATGC CGCAGTAAAC TTTGTCCTAA AACGGATGGG CAGGGTCCGG
ACCACGGATG AGATCCTTGC CGCGATCGGA TAA
 
Protein sequence
MPELSLPKKT TALVVIDLQK GIAARPTEPH SAADVIRNAA RLVQAFRKNA MPVFLVHVVS 
TPETMLAVTS DTTFSRPGTM PPDWSEFVPE IAPVPTDVII GKKQWGAFYG TDLELQLRRR
GMDTIVLCGI ATDYGVESTA RFAYEYGFEQ VFSEDAMASM TAEQHHAAVN FVLKRMGRVR
TTDEILAAIG