Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1014 |
Symbol | |
ID | 5411750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 994545 |
End bp | 995117 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640868240 |
Product | isochorismatase hydrolase |
Protein accession | YP_001404175 |
Protein GI | 154150557 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.584957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAC TCAGTCTTCC CAAAAAAACA ACCGCACTTG TCGTTATCGA TCTCCAGAAA GGAATTGCCG CCCGGCCTAC AGAGCCTCAT TCTGCAGCAG ATGTCATAAG AAACGCCGCC CGGCTGGTTC AGGCATTCCG GAAAAATGCC ATGCCGGTCT TCCTGGTGCA CGTGGTCTCG ACACCGGAGA CCATGCTTGC GGTAACAAGC GATACAACCT TTTCCCGGCC CGGGACCATG CCCCCGGACT GGTCGGAATT TGTCCCGGAG ATCGCGCCTG TTCCCACTGA TGTGATAATA GGAAAGAAAC AGTGGGGTGC ATTCTACGGC ACGGATCTCG AACTCCAGCT CAGGCGGAGA GGAATGGATA CGATCGTGCT GTGCGGGATC GCCACCGATT ACGGTGTGGA AAGCACGGCA CGCTTTGCCT ACGAGTACGG CTTTGAGCAG GTATTTTCTG AGGATGCGAT GGCCTCGATG ACCGCAGAGC AGCACCATGC CGCAGTAAAC TTTGTCCTAA AACGGATGGG CAGGGTCCGG ACCACGGATG AGATCCTTGC CGCGATCGGA TAA
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Protein sequence | MPELSLPKKT TALVVIDLQK GIAARPTEPH SAADVIRNAA RLVQAFRKNA MPVFLVHVVS TPETMLAVTS DTTFSRPGTM PPDWSEFVPE IAPVPTDVII GKKQWGAFYG TDLELQLRRR GMDTIVLCGI ATDYGVESTA RFAYEYGFEQ VFSEDAMASM TAEQHHAAVN FVLKRMGRVR TTDEILAAIG
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