Gene Mboo_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0987 
Symbol 
ID5410933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp968536 
End bp969330 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content57% 
IMG OID640868213 
ProductABC transporter related 
Protein accessionYP_001404148 
Protein GI154150530 
COG category[P] Inorganic ion transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.343956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.294383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA TTGCCGGCCT TGACGTAAAG TACGGGGCAA AGAAAGTGCT CGATGCGATC 
ACGTTAGCTG CGGACAAGGG CCGGTTTGTT GGGATCATCG GGCCAAACGG TTCCGGGAAG
ACAACGCTGT TGAAAACAAT AAGCCGGGTA CTTGAACCTT CAGCCGGGAT AATAACCCTC
GATACAATCC CGCTTGACCG GATGAAAAGC CGGGATCTTG CCCGCTCGCT TGCGGTTGTG
CCGCAGGAGA CCGGGACCGG CTTTGACTTT TCTGTCAGGG ACGTAGTGCT GATGGGCCGG
TATCCCTATA TCGGCCGGTT CTCAAAAGAG ACCGCTGAAG ACGACCGCAT CTGCTGCAGG
GCCATGGAAC TGACCGGGAT CGCGCACCTT GCAGACCGCC CGATCACTGA GATCAGCGGC
GGCGAACTCC AGCGAACCAT CATCGCCCGT GCACTCGCCC AGCAGCCCCG CCACCTCCTG
CTCGACGAGG CGACCTCACA CCTGGACATC AGCCACCAGG TAGATATCCT TACCACCATC
AAAAAACTCT CCAAAGAGAT CGCGGTGATC GGCGTCTTCC ACGACCTCAA CCTCGCTGCG
TACTTCTGCG ACGAGATCAT GGTGATACAA TCGGGAAAGA TCGTTGCGGC CGGTCCACCG
GAGGAGATCC TGACCCCGGC GATGCTGCAG AGCATCTTTG ATCTCGATGC ATCGGTCAGC
ATCCACCCGG TCACCCACAA GCCGGTAATC GTTCCGCTCC CCAAAGGGAT GTATAAAACC
GGTGAAGATC CATGA
 
Protein sequence
MIDIAGLDVK YGAKKVLDAI TLAADKGRFV GIIGPNGSGK TTLLKTISRV LEPSAGIITL 
DTIPLDRMKS RDLARSLAVV PQETGTGFDF SVRDVVLMGR YPYIGRFSKE TAEDDRICCR
AMELTGIAHL ADRPITEISG GELQRTIIAR ALAQQPRHLL LDEATSHLDI SHQVDILTTI
KKLSKEIAVI GVFHDLNLAA YFCDEIMVIQ SGKIVAAGPP EEILTPAMLQ SIFDLDASVS
IHPVTHKPVI VPLPKGMYKT GEDP