Gene Mboo_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0970 
Symbol 
ID5409819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp955059 
End bp957059 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content52% 
IMG OID640868196 
Productferrous iron transport protein B 
Protein accessionYP_001404131 
Protein GI154150513 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0839864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA GGATACGTAT CGCCCTTGCC GGGAACCCGA ATGTAGGCAA AAGCACGATT 
TTCAATACCC TGACCGGATC CCGGCAGCAC GTTGGCAACT GGCCGGGTGT CACCGTAGAG
AAAAAGAGCG GCTTTGCCAC GGTTGGAAAT ACTGAAATCG AGATCGTTGA TCTCCCCGGG
ACCTACAGCC TGACGGCATA TAGTGTTGAC GAAGTTGTTG CCCGTGATTA TATTATCGAA
GAGAGGCCTG ATGTAGTCAT CCATATCGTT GACGCCACCA ACTTCGAACG AAACCTGTAC
CTCACTACCC AGCTCATGGA ACTTGGCGTA CCGCTGGTTA TGGCTTTGAA CATGTCTGAT
GAGGCAGAGA AAAAGGGCGT AACTATCAAC CCCTCCCGGG TCAAGGAATA TTTCGAAATA
CCTGCAGTAA AAACTGTGGG AAGCCGGGGA GAAGGTCTTA ATGAACTTCT CCGGACGGCT
ATTGCCGAAG CCGGGACTTC TCCTCACCAT GAGCATTCCA TCGGGTACGG GAACGAGATC
GAGCAGCATA TTGCAAATCT CATCATCGCG CTCAAGACTG ATCCCGTTCT TACTGCCCAT
TATCCCCCGA GATGGATGGC TATTCGTCTT CTTGAAGGCG ATGAGAAGAT CTCTGATGAG
ATTCGATCCA GCCCGGCCTT TGATGCAATA ACCAGAGAGC TTGCCAAAAT TGATCTTACG
CTTACCGAAG CCGCTATGGC TGACCGGCGG TATGAACTGA TCGCTGCATT CATGCCACAG
GTCTGCCCGA CCTGCGTCCG GGGAATGTCT GCATCTGACC TCATCGATCA TGTTGCAACG
AATCGTTACC TGGGTATCCC GATTTTCCTT GCACTTATGT GGGGCGCCTT CCAGCTTACC
TTTGCGTTCG CTGCGCCTTT TACATCTGCC ATCAATTTCG CGATGAATGC TCTTGGTTCT
GCAGTTACCG CAGGGATCAG GCCGGAGTGG CTTGCATCGT TTATCAACAA TGGCATTATT
GGCGGCGTCG GGACGGTTCT TGGGTTTGTT CCCAATATTT TTATCCTGTT TTTGATCCTT
GCAATTCTTG AAGACAGCGG TTATCTGGCC CGTGCCGCTT TTGTCATGGA CCGGCTGATG
TATTCCATCG GTTTGCCCGG CAAATCATTT ATTCCGATGC TCATCGGATT TGGCTGCAAC
GTGCCGGCCA TTATGGCTAC CCGGACCATC GAAGACAGGA AAGACAGGCT CATTACGATC
TTGATTAACC CGTTCATGTC CTGCGGAGCG CGTCTCCCGG TTTACGTGCT CTTTGCCGGG
GTCTTTTTCC CGCACAGTGC CGGAACGGTA ATATTTTTCC TGTATGTACT TGGCATCGTG
ATTGCAATCC TGTCGGCAAA ACTCTTCAGG TTAACGATCC TTCCTGGTAA GCCGGCACCA
TTCCTGATGG AAATGCCGCC TTACCGTTTC CCGACAGGCA GGACATCGCT TGTCCATATG
TGGGACCGGG GTTCAATGTA CCTCCAGAAA GCCGGACTTG TCATCTTTGG TATCGCCATC
ATTGTCTGGG GCCTGGCATC CCTTCCCTTG GGCGTTGCAT ATGGTAGTGA GGGAAGTTAT
GTGGGAATTC TCGGGCACGT CATCCAGCCC GTTGTTGCCC CACTCGGGTT TAACTGGAAG
ATCACTGTTG CCCTCATTTT CGGCTTTATG GCAAAAGAAG TGGTGATAGG ATCGCTTGGC
GTCCTCTACG GTGTTGGCGA AAACCACGTG GCCCTGGGAA GTGCGCTTCA CGCCGATCCT
ACGCTGAGTG CGGTCACGGC TTTGGCCTTG CTTGTCTTTG TATTGATCTA TGTTCCGTGC
ATGTCCTCGG TTGCAGTTAT TAAAAAAGAG ACCGGCTCAT GGAAATGGAC GGTCTTTTCC
GTATTGTACG GGCTTGTTAT CGCTTACCTC GCAGCGCTGG CTGTGGTACA TATCGCACCG
TTTTTTATCG GGGGTGCCTG A
 
Protein sequence
MKNRIRIALA GNPNVGKSTI FNTLTGSRQH VGNWPGVTVE KKSGFATVGN TEIEIVDLPG 
TYSLTAYSVD EVVARDYIIE ERPDVVIHIV DATNFERNLY LTTQLMELGV PLVMALNMSD
EAEKKGVTIN PSRVKEYFEI PAVKTVGSRG EGLNELLRTA IAEAGTSPHH EHSIGYGNEI
EQHIANLIIA LKTDPVLTAH YPPRWMAIRL LEGDEKISDE IRSSPAFDAI TRELAKIDLT
LTEAAMADRR YELIAAFMPQ VCPTCVRGMS ASDLIDHVAT NRYLGIPIFL ALMWGAFQLT
FAFAAPFTSA INFAMNALGS AVTAGIRPEW LASFINNGII GGVGTVLGFV PNIFILFLIL
AILEDSGYLA RAAFVMDRLM YSIGLPGKSF IPMLIGFGCN VPAIMATRTI EDRKDRLITI
LINPFMSCGA RLPVYVLFAG VFFPHSAGTV IFFLYVLGIV IAILSAKLFR LTILPGKPAP
FLMEMPPYRF PTGRTSLVHM WDRGSMYLQK AGLVIFGIAI IVWGLASLPL GVAYGSEGSY
VGILGHVIQP VVAPLGFNWK ITVALIFGFM AKEVVIGSLG VLYGVGENHV ALGSALHADP
TLSAVTALAL LVFVLIYVPC MSSVAVIKKE TGSWKWTVFS VLYGLVIAYL AALAVVHIAP
FFIGGA