| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0870 |
|---|
| Symbol | |
|---|
| ID | 5410583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 849056 |
|---|
| End bp | 849931 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640868096 |
|---|
| Product | nitrite/sulfite reductase hemoprotein beta subunit |
|---|
| Protein accession | YP_001404031 |
|---|
| Protein GI | 154150413 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGT TGCACTCTCC GGTCAATCAG ACGCTCTACT CCCGGGGTGG GATCATTACG
GAAGGTGATC CCAATTTCTG TATTGTCCGC CTCCGCATGC CGGCCGGTAT GATCACCCCG
GCACAGATGC AGGGTCTGGG GGAAATTGCG AGCCGTTACG GGATAAACGA TCTTCACTTC
ACGACACGCC AGACCGTGGA GTTGCCGCAC GTGGACCCAA GCCGGCTTGA GGATCTTGTC
CGGGACCTGG AACGAAACGG GACACCTCTT GGTGCGGAGC GGGAAGAGGT TGTCAACGTG
ACCGCGTGCC TGGGTACCCG GCACTGCAAA TTCGGCATTA TCGACAGTGT TGCTCTCGCG
CAGGAGATCG ACCGGAAATT TTTTGGCCGG GAACTTCCGG TCAAAGTCCG GATTGCCATT
TCATCCTGCC CGAACGGTTG CGAAAGCGAG CGCCTCAATG AGATCGGCAT TACCGGGACC
CGGCGCCCGG TCCGGGATCC CGGACTCTGC ACCGGCTGCG GGACCTGCAC CCATTACTGC
CGGGAAAAAG CCATCGAGGT AACCGACGGC GTCGTGGTTC TCCACAAGGA TCTCTGCATG
GAATGCGGGT TCTGCATCCT TCCCTGCCCG TTCAGGCTCA TCTCTGCCGA GGATCCTGAG
TACCGGATCA CAATCGGGGG ACGCAGGGGC CGGCATCCGA AAGTTGGCAG GCACCTCATC
ACGGTAAAGA CGCAGGAAGA TGTAATCCGG GTGGTTGACC GGATCATCTA CTGGATCTAC
CGGCAGGCCT CAAGCGGCCA GATGCTCCCC GAACAGCTCG ATGAACTTGA ATTCGACGAA
TTCAAGAAGT CAATTGTAAA AATGATCGAA GGCTAG
|
|---|
| Protein sequence | MSQLHSPVNQ TLYSRGGIIT EGDPNFCIVR LRMPAGMITP AQMQGLGEIA SRYGINDLHF
TTRQTVELPH VDPSRLEDLV RDLERNGTPL GAEREEVVNV TACLGTRHCK FGIIDSVALA
QEIDRKFFGR ELPVKVRIAI SSCPNGCESE RLNEIGITGT RRPVRDPGLC TGCGTCTHYC
REKAIEVTDG VVVLHKDLCM ECGFCILPCP FRLISAEDPE YRITIGGRRG RHPKVGRHLI
TVKTQEDVIR VVDRIIYWIY RQASSGQMLP EQLDELEFDE FKKSIVKMIE G
|
|---|
| |