| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0857 |
|---|
| Symbol | gatA |
|---|
| ID | 5411476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 833174 |
|---|
| End bp | 834478 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640868083 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_001404018 |
|---|
| Protein GI | 154150400 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.856443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGAGC ATACGATCCG TTTTGAACCA GACGACCGGT ACAACGCGTT CCTGACCGTC
TGCCCGCACC CGGACCATGG CAAAGGAGAT CTCTCCGGCA TCGCAGTTGC CGTCAAGGAC
AATATCTCAA CCCTGGGCAT CGAGACTACC TGCGCATCAA AGATCCTCAA AGGCTATGTT
CCGCCCTACG ATGCGCACGC GGTGACCCTG CTCAAAAATG CCGGCGCAGC GGTGGCCGGC
AAGACCAACA TGGACGAGTT CGGGATGGGC ACAAGCACCG AGAACTCGGC GTTTGGTCCC
ACCTTAAATC CCCGTGACAC CGGAAGGGTT CCCGGCGGAT CTTCCGGGGG AAGTGCTGCC
GCGGTTGCAG CGGGCATGGT GCGGATGGCG CTTGGCACTG ACACCGGGGG TTCAATCCGC
TGCCCCGCTG CGTTCTGCGG GATCGTGGGC CTGAAGCCTA CGTACGGCCG GGTCTCCCGG
TACGGCCTGA TCGCGTACGC AAATTCGCTG GAGACGATCG GTCCGATGGC AGCAAACGTG
TCCGATGTCT CGCTGCTGAT GTCGGTGATT GCCGGGCACG ACCGGCGGGA CACCACCTCG
TACGACCGGC CGTACCAGCA CACCCCGTCC GCTGAGATAA AAAGGCTGAG GATCGGTATC
CCGGAGGAGT ACTTCGGGGC AGGGGTTGAC CCGGAGGTTG CATCCGTAGT CAAGAGGGCG
ATAGGCCGGC TTGAAGAGCT CGGCGCCGTC ACCGTCCCGT GCAGCATCCC GTCGATGGAA
TATGCACTCG CCGCTTACTA TGTGATCTGC ACCAGCGAGG CCAGTTCCAA CCTTGCGCGG
TTCGACGGGG TCCGGTACGG CCCGGCTGCC GATACCAAAA AGTCGTGGCA TGCGGCGTAC
CAGGACGTGC GGAAGCAGGG GTTCGGCCCC GAGGTCCGGC GCCGGATCAT GCTCGGGACG
TTTGCCCTTT CCTCGGGATA TTACGGGAAG TATTATGCAA AAGCGCAGGT GGCCCGGGAG
AATGTCAGGA AGGACTTTGC CCGGCTCTTA ACTGACGTGG ACGTGCTCTG TGGTCCCACG
ATGCCAACCA TCGCGTTTAA GCTGGGCGAA AAGAGCGACC CGCTCTCCAT GTACCTTTCC
GATATCCTGA CCGTGCCGGT GAACCTTGCC GGTATACCGG CGATCTCGGT GCCCTGCGGG
AAGGTGCAGG GGATGCCGGT CGGGCTCCAG GTGATGGGCA GGCCGTTTGA AGACGAGCGC
GTGGTGGACG TTGCCTATGC GTACGAGCAG GCGGTGAAGG CATGA
|
|---|
| Protein sequence | MAEHTIRFEP DDRYNAFLTV CPHPDHGKGD LSGIAVAVKD NISTLGIETT CASKILKGYV
PPYDAHAVTL LKNAGAAVAG KTNMDEFGMG TSTENSAFGP TLNPRDTGRV PGGSSGGSAA
AVAAGMVRMA LGTDTGGSIR CPAAFCGIVG LKPTYGRVSR YGLIAYANSL ETIGPMAANV
SDVSLLMSVI AGHDRRDTTS YDRPYQHTPS AEIKRLRIGI PEEYFGAGVD PEVASVVKRA
IGRLEELGAV TVPCSIPSME YALAAYYVIC TSEASSNLAR FDGVRYGPAA DTKKSWHAAY
QDVRKQGFGP EVRRRIMLGT FALSSGYYGK YYAKAQVARE NVRKDFARLL TDVDVLCGPT
MPTIAFKLGE KSDPLSMYLS DILTVPVNLA GIPAISVPCG KVQGMPVGLQ VMGRPFEDER
VVDVAYAYEQ AVKA
|
|---|
| |