Gene Mboo_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0772 
Symbol 
ID5410712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp743704 
End bp744885 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID640867996 
Productbifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase 
Protein accessionYP_001403933 
Protein GI154150315 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins
[COG1795] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03126] formaldehyde-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.58783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTG TCGGAGAAGC ACTCATCGGC GAGGGCGCAG AACTCGCGCA CATCGACCTG 
CTGCTCGGAA GCAAGGAAGG CCCGGTCGGA TCCGCGTTTG CAAACGCGGT ATCCCAGCTG
TCCATGGGAC ACACCCCGCT CCTTGCAGTT GTCCGCCCCA ATCTGCTCAC CAAGCCTGCA
ACCGTCATCA TCCCCAAGGT GACGTTAAAG GACATGGAGC AGGTCAACGA GATGTTCGGG
CCTGTCCAGG CAGCGGTTGC AAAGGCAATC GCCGACAGCC TTGAGGAAGG CGCGTTCAAG
GACATCGACA TCGAGGGGAT CGCGATCATC GCGTCGGCCT TTGTCCACCC TGAGGCAAAG
GACTACAACC GGATCTACCG GTACAACTAC GGTGCCACCA AGCTCGCCCT CCACCGGGCG
CTTGACAAGT TCCCGGACGA GAAGACCCTT GTGTACGAGA AGGACCGGGC TGCGCACGGT
ATTATGGGAT TCAAGGTGCA GCGCCTCTGG GACCCGCCGT ACCTGCAGGT CGCCATGGAC
CTCGTGGACA TGGGCAAGGT CGCCCAGGTC TTAAAGGAAG TGCCGCAGAA CGATCACGTG
ATCATCGAGG CGGGAACGCC GCTCATCAAG AAGTTCGGCC TGAACGTTAT CGGCGAGATC
CGGAAACTCC GCCCGAATGC GTTCATCATC GCGGACATGA AGATTCTCGA CACCGGCAAT
CTCGAAGCCC GCATGGCAGC AGATGCCACC GCAGACGCGG TCGTGGTCTC GGGTCTTGCC
CCGACTTCGA CCATCGAGAA GGCAATCTCC GAGGCCCGCA AGGTGGGCAT ATACTCGATC
ATCGATATGC TCAACGTGCA GAACCCGGCA AAGCTTATCG AGAAGCTCAA AGTGAAGCCT
GACATTGTCG AGCTCCACCG TGCCATTGAC ACCGAGGAGA CCGCCCATGC GTGGGGCGAC
ATCCCGGCCA TGAAGAAGGC AGCAGGCGGG AAACTGCTGG TTGCAACGGC CGGCGGCATC
CGGGTCGAAG TCGTGAAAGA CGCCCTCAAG GCAGGAGCAG ATATCCTTGT GGTCGGCCGG
AGCATCACAG CGAGCAAGGA CATCGGGCAT GCAACCGATG AGTTCCTTGA CCAGCTCAAC
CGGGAAGAGA TCGACCAGTT CCGGATTATG ACTGATTTCT AA
 
Protein sequence
MYLVGEALIG EGAELAHIDL LLGSKEGPVG SAFANAVSQL SMGHTPLLAV VRPNLLTKPA 
TVIIPKVTLK DMEQVNEMFG PVQAAVAKAI ADSLEEGAFK DIDIEGIAII ASAFVHPEAK
DYNRIYRYNY GATKLALHRA LDKFPDEKTL VYEKDRAAHG IMGFKVQRLW DPPYLQVAMD
LVDMGKVAQV LKEVPQNDHV IIEAGTPLIK KFGLNVIGEI RKLRPNAFII ADMKILDTGN
LEARMAADAT ADAVVVSGLA PTSTIEKAIS EARKVGIYSI IDMLNVQNPA KLIEKLKVKP
DIVELHRAID TEETAHAWGD IPAMKKAAGG KLLVATAGGI RVEVVKDALK AGADILVVGR
SITASKDIGH ATDEFLDQLN REEIDQFRIM TDF