| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0741 |
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| Symbol | |
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| ID | 5410369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 706957 |
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| End bp | 708855 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640867962 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_001403902 |
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| Protein GI | 154150284 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.546861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.319433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATA AGGCACTCGG CCTCACAGCG GGAATCGAGA TCCACCAGCA GCTGGACACA
AAAGAGAAGC TCTTCTGCCA CTGCCCGACC ACGATCCGGG ACAACGCGGA TCATTCGGGA
GAGTTCTTCC GGTACCTGCG GGCCACCGAG AGCGAGATGG GTGCGATCGA CCGGGCCGCA
CAGGAAGAGA TGAAGCGGGC GAGAAAGTTC GTGTACTACA CCTACCCGAC TACCTGCCTT
GTCGAGAACG ACGAGGAGCC GCCTGCGCCG CTCAACGATG AGGCGCTCGA CATCGGCCTT
ACCATCGCCA AGACCTTTGG CATGACCCCG ATCCCGCAGG TGCACACGAT GCGCAAGCTC
GTGATCGACG GCTCGAACAC GAGCGGGTTC CAGAGGACGG CCCTTGTCGC CATCAACGGC
GCACTCCCGA ACGGCGGGAG CATCGAAACG ATCTGTATCG AAGAAGAGGC GGCCCAAAGG
GTCAAGGACG ATATCTTCTC GCTTGACCGG CTCGGGATCC CGCTCGTGGA GATCACCACC
TCGCCCTGCA TGCACACCCC CGAGGACGTG CAGCAGGTGG CCGAATACAT CGGGATGGTA
CTCCGCTCGA CCGGCGCGGT TAAGCGCGGC CTTGGCACGA TCCGGCAGGA CGTGAACATC
TCGATTAAGG ACGGCGCCCG GGTCGAGATC AAGGGCGTGC AGGACCTCGC CCTGATCGCC
GAGGTCGTGC GCCGCGAAGT CCAGCGGCAG CAGGCTCTCC TCGCGATCCA GAAAGAACTC
ATCCAGCGCC ACGCATGCGT GGGTTCCGAT CAGATCGATA TTACTGCCCT TTTTAAGGAG
ACCAAGTCCG CAGTGCTCAA AAAATCCAAA AAGATTTTCG CCCTTGTCCT GCCGGGCTTT
GCCGGCCTTG TCGGCCGCGA GATCCAGCCC GGCCGCCGGC TCGGGAGCGA GATGTCGGAC
TACGCGAAGA AGTGCGGCGT GGGCGGAATC TTCCACACGG ACGAGCTCCC CGCGTATGGC
GTGACCGAAG AAGAAGTCAC ACAGCTCCGT GAGTTCGTCC GAGCCAATGA GCAGGACGCC
GTGATCCTTG TCTCCGGCGC AAACGAGAAG CAGGCCGCGT GCGCCTGGAA CCAGGTCCAC
ACCCGGGCGA ATCTTGCCCT GTCCGAGAAG CCCGTTCCCG AAGAGACGCG GAAGATGCTC
GAAGAGGGCA GCACTGCGTA CATGCGCCCG CTGCCCGGTG CAGAGCGAAT GTACCCCGAG
ACCGATGTGC TCCCCGTCCG GATCGATGAG GCCCGGTGGA ACGCGGTGAC CGTGCCGGAA
CTTTTGACCG TGAAGGCCGA ACGGTTTGCA AAGGATCTCG GCCTTGACCC GGCGGTCGCG
AAGCAGATGG CGTTCTCCGA GTACCGGCCT CTCTTTGAGC GAGCAGTTGC CGAAGGGATC
AAGCCAACCC TCGCGTCCCG CACGCTCCTT GATCACCTCA CGAAGATCCG ACGCGACGGT
GCGGACACCG ATAAGATCAC AGACGACGCA ATCCTAGCGG TGCTTCGGGC AGTTAGTGGG
ATACGGCTTG TCAGTGCTAC TGGACATATC AACGTATCTG GTTCTGCTAC GGTAGAGGTG
GCAAAAGAGG CCATTCCCGA TATCCTTACT GCGGTTGCTA ATGGGAGCAC CGCAGAAGAC
GCGATGGCAA AACTCGCTCC GACCGTCTCC CGCGATGAGC TCGAAGCAGT GATCAAAAAG
ATTGTTGCCG ACCGCAAGGA GTTTGTCACC GAGAAGCAGA AGGGCGCTCT CGGGCCGCTG
ATGGGCGTGG TGATGCAGGA GGTCCGGGGC TCGGTGGATG GGAAGGTTGT GAGCGAGCTG
CTGAGGAAAG AGATTGAGAA GGTGCTGGTC GGGAAGTAA
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| Protein sequence | MDYKALGLTA GIEIHQQLDT KEKLFCHCPT TIRDNADHSG EFFRYLRATE SEMGAIDRAA
QEEMKRARKF VYYTYPTTCL VENDEEPPAP LNDEALDIGL TIAKTFGMTP IPQVHTMRKL
VIDGSNTSGF QRTALVAING ALPNGGSIET ICIEEEAAQR VKDDIFSLDR LGIPLVEITT
SPCMHTPEDV QQVAEYIGMV LRSTGAVKRG LGTIRQDVNI SIKDGARVEI KGVQDLALIA
EVVRREVQRQ QALLAIQKEL IQRHACVGSD QIDITALFKE TKSAVLKKSK KIFALVLPGF
AGLVGREIQP GRRLGSEMSD YAKKCGVGGI FHTDELPAYG VTEEEVTQLR EFVRANEQDA
VILVSGANEK QAACAWNQVH TRANLALSEK PVPEETRKML EEGSTAYMRP LPGAERMYPE
TDVLPVRIDE ARWNAVTVPE LLTVKAERFA KDLGLDPAVA KQMAFSEYRP LFERAVAEGI
KPTLASRTLL DHLTKIRRDG ADTDKITDDA ILAVLRAVSG IRLVSATGHI NVSGSATVEV
AKEAIPDILT AVANGSTAED AMAKLAPTVS RDELEAVIKK IVADRKEFVT EKQKGALGPL
MGVVMQEVRG SVDGKVVSEL LRKEIEKVLV GK
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