| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0710 |
|---|
| Symbol | |
|---|
| ID | 5411612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 673783 |
|---|
| End bp | 675054 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640867930 |
|---|
| Product | phenylacetate--CoA ligase |
|---|
| Protein accession | YP_001403871 |
|---|
| Protein GI | 154150253 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0777272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTC TGAAACCCGC AGATCTCAAG GCGCTCCAGT TTAAACGGCT GAAAAAAACC
CTTCGCGCTG TACAGCATGT GGATTTTTAC CGGCAACAGT TTGAAAAGGC CGGGGTTTCT
GCTACGGATA TCAAAACCCT TGAAGACATC CCGAAGTTGC CTTTCACCAG AAAACAGGAT
CTCCGTGACG GGTATCCCTT TGGATTTTTT GCAGTTCCCA TGCAAAAGAT TGTTCGGATC
CACACAACTT CAGGTACCAC CGGCAAACCT ACCGTTGTCG GTTATACCCG CACGGATCTG
GAGACGTGGG CCAGCCTCAT CGCACGGAAT ATGACCATGA TCGGTATCGG GAAGAATGAT
GTTTTCCAGA ACATGGTCAA TTATGGAATG TTTACCGGTG GGCTGGGGTT CCATTACGGT
GCAGAACTCA TAGGAATGAC GGTGATCCCC AGCGCTACCG GAAATACCCG ACGCCAGATA
GAGATGATCC GTGATTTCGG TGTGACTGCC ATCCACTGCA CCCCCAGTTA TGCCATGCAT
CTGTCAGAAG TCGCGGAGGA GATGGGTGAA CCTCTGGAAA GCCTGAAAAC CGGCATTTTT
GGTGCCGAAC CCTGGTCAGA TACCATGCGC CATACTCTCG AAGACCGTCT GGGTGTCACG
GCATTTGATT CGTACGGTAT GAGCGAGCTC TTCGGACCGG GAGTTGCTTT CGAGTGCCCC
GAACGGGATG GACTGCACAT CTGGCACGAC AGTTATCTGG TAGAGATCAT CGATCCGGTC
AGTGGGGAAA ATCTCTCTGA TGGGGAACGG GGAGAACTGG TGGTGACGCC GCTTGTCAAG
GAGGCGATGC CACTCATCCG TTACCGGACT GGTGATGTCA CCATGCTCAT GGAAGACGGA
TGCCTCTGCA GGCGGGGAAA AAAGATCGCC CGGTTAACCG GCAGGAGCGA CGATATGCTC
ATTATCCGCG GCATCAATGT GTTCCCCTCC CAGATTGAAC ATGTACTTCT CAGGATCCCG
GAGGTAGGCA ATCAGTTTAT GGTATATATC GACAGAATCA ATCATCTGGA CGAGATGACC
GTGGAAGTCG AGATCAATCG CAGCCATTTT TCCGGGGAAC TTGCGGATCT TGCCAAGATC
CAAAAAAAGG TAGTAAAAGA ACTGCACGAC ACACTTGAAC TGCGGACTAC AGTAAAACTG
GTAGAACCCG GCTCCCTGCC ACGATTTGAG GGAAAAGCCA AGCGGGTCAT CGACCGCAGA
GGTGAGATCT GA
|
|---|
| Protein sequence | METLKPADLK ALQFKRLKKT LRAVQHVDFY RQQFEKAGVS ATDIKTLEDI PKLPFTRKQD
LRDGYPFGFF AVPMQKIVRI HTTSGTTGKP TVVGYTRTDL ETWASLIARN MTMIGIGKND
VFQNMVNYGM FTGGLGFHYG AELIGMTVIP SATGNTRRQI EMIRDFGVTA IHCTPSYAMH
LSEVAEEMGE PLESLKTGIF GAEPWSDTMR HTLEDRLGVT AFDSYGMSEL FGPGVAFECP
ERDGLHIWHD SYLVEIIDPV SGENLSDGER GELVVTPLVK EAMPLIRYRT GDVTMLMEDG
CLCRRGKKIA RLTGRSDDML IIRGINVFPS QIEHVLLRIP EVGNQFMVYI DRINHLDEMT
VEVEINRSHF SGELADLAKI QKKVVKELHD TLELRTTVKL VEPGSLPRFE GKAKRVIDRR
GEI
|
|---|
| |