Gene Mboo_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0709 
Symbol 
ID5411611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp672482 
End bp673783 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content51% 
IMG OID640867929 
Productphenylacetate--CoA ligase 
Protein accessionYP_001403870 
Protein GI154150252 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0797552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTATT GGGATCCCCG AATAGAAGAG ATGCCCGTTG AGGATCTCCG GAAAACCCAG 
TATAAACTGT TAAAAAGTCT TGTCTACCGG CTCTATAGTT TTTCGTCTTT TTACCATGAC
CGTATGAAGG AGCAGAAGGT CCACCCGGAT GATATCAAGA AATTATCTGA TATCAGGAAA
CTGCCCTTCA TGTTCAAGCG CGATCTCAGG GACAATTATC CTAACCGGAT CTTCACTGCT
TCGCAGGAAG AACTGGTACG GTATCATGTC TCTTCAGGCA CTACGGGGAA GCCGACAGTA
GTCGGTTATA CACAGCGGGA TCTTGACCTC TGGACCACCT CACTTGCCCG GGGACTCACT
TCCGTTGGTC TTCGCAGAGG GGATGTCATT CAGGTAAGCT ATGGTTATGG CCTGTTTACC
GGGGGACTTG GGATGCATTA CGGGGCAGAG AGGATCGGTG CAACCGTGCT CCCCACCAGT
GTCGGGAATA CCGAACGCCA GCTCGAACTG ATGCAGGATC TCGATGTCAC GGCAATTGCC
TGCACTCCCT CATATCTCCT CCACATCGGC GAAGTTGCAG AAAAGATGGG AATCGATATT
AAAAAGGACA CCCGGCTCAG GACCGGCATT CTTGGAGCGG AGCCCTGGAC CGAAAATATG
CGGGCCAGAA TCGAAAACTG GCTGGGGATC AAGGCATATG ACATATACGG GACAAGCGAA
CTCTCCGGCC CCATGTTTAC AGAATGTTCT GAGCAGAACG GGTTCCATAT CTGGTCCGAT
ATCGCTTATG TGGAAATCGT TGATCCCAAA ACCGGTGAAC CTTTGGATAC AGGCGAAAAG
GGTGAACTGA CGATCACGAT GCTCCAGAAA GAGGCGCTCC CGATGATCCG ATACCGGATC
GGAGATGTCT CCTCGATCGA GGATGAAGTG TGCCCCTGCG GCAGAACAAG CCCAAGGATA
AAACGGATCC AAGGAAGGGT GGATGATATG TTGATCATCC GCGGCATCAA CGTCTTCCCA
TCACAGGTTG AGTATACGTT GATGTCGATT CCCGAGATAG GAGAGCACTT CCAGATCGTA
GTCGAGCGCT CGGGTGCACT TGATGATATG CTGGTCAGGG TGGAGCTGAC CAAAGAGTCC
TTCAGCGACA AGATCAACGA TCTCATGAGG ATCCGGCAGA ATGTAGAACA CCGGCTCAGA
AACACACTGA ATGTCGCTGT GGATGTCGAA CTTGTGGAGC CGGGATCCCT TCCGAGGTTT
GAAGGGAAGT CAAAAAAAGT GATTGACAAG AGGGTGTTGT AA
 
Protein sequence
MQYWDPRIEE MPVEDLRKTQ YKLLKSLVYR LYSFSSFYHD RMKEQKVHPD DIKKLSDIRK 
LPFMFKRDLR DNYPNRIFTA SQEELVRYHV SSGTTGKPTV VGYTQRDLDL WTTSLARGLT
SVGLRRGDVI QVSYGYGLFT GGLGMHYGAE RIGATVLPTS VGNTERQLEL MQDLDVTAIA
CTPSYLLHIG EVAEKMGIDI KKDTRLRTGI LGAEPWTENM RARIENWLGI KAYDIYGTSE
LSGPMFTECS EQNGFHIWSD IAYVEIVDPK TGEPLDTGEK GELTITMLQK EALPMIRYRI
GDVSSIEDEV CPCGRTSPRI KRIQGRVDDM LIIRGINVFP SQVEYTLMSI PEIGEHFQIV
VERSGALDDM LVRVELTKES FSDKINDLMR IRQNVEHRLR NTLNVAVDVE LVEPGSLPRF
EGKSKKVIDK RVL