| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0708 |
|---|
| Symbol | |
|---|
| ID | 5411610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 672046 |
|---|
| End bp | 672480 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640867928 |
|---|
| Product | amino acid-binding ACT domain-containing protein |
|---|
| Protein accession | YP_001403869 |
|---|
| Protein GI | 154150251 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4747] ACT domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.464159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.126423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGA AAAAGTACAT CATCAAACAG ATCTCGATAT TTTCGGAAAA CCGACCGGGC
AGGCTCGCTT CCGTCGCCCA CGCTCTGGGG GAGGAGAAGA TCAATATCCT TGCCTTCAGC
ATAGCCGAAG CAAGTGGTTT TGGTGTAATC CGGGCTCTGG TGGATCACCC GGAGAAAGCA
TTTGAAAAAC TCTCATCACT TGGTTTTAAT GTGGCCTTTA CCGAGGTGAT CGCCGTCCAG
ATGAAAGATC AGCCGGGGGG CCTCTACGAG ATTGCAAAGA TCCTTGGCGA TGCTGGCATC
AACATCGAAT ATTCCTATGC GTATTCCGGG AAAAAAGCCG CAGTGCTTAT TCTCCGCGTG
GATCAGGTAG AAGAAGCGAT CGATAAGGTT CTGGCATCCG GGGCAACCTT GCTTGAGTAC
TCCGTATTCC ATTAG
|
|---|
| Protein sequence | MDRKKYIIKQ ISIFSENRPG RLASVAHALG EEKINILAFS IAEASGFGVI RALVDHPEKA
FEKLSSLGFN VAFTEVIAVQ MKDQPGGLYE IAKILGDAGI NIEYSYAYSG KKAAVLILRV
DQVEEAIDKV LASGATLLEY SVFH
|
|---|
| |