Gene Mboo_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0652 
Symbol 
ID5410044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp619211 
End bp619954 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content56% 
IMG OID640867871 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001403813 
Protein GI154150195 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCA CCTTCCTTGG GACAAACGGC TGGTATGATT CTCTCACGGG AAATACCGTA 
TCCGCGCTGA TCACGGCACG GGATTACGAT ATCATCCTTG ACGCGGGGAA CGGGATTGCA
AAAGCCGACC GGTACATGAC GCAGGACAAA CCGGCCTTTT TGTTTCTCAG CCACTTCCAC
CTCGACCATA CCGAAGGTCT TCACACGCTG GTAAAATTCC GGTTCAAAAA AGGCCTCTCC
ATCTGCGGGG GAGTGGGGAC AACCGCAGAC CTTGCAGGAC TCCTCCGCGA ACCCTACACG
GTACCGCTTG ACCGGGTCCC CTTTGCCGTC ACCGTAAAAG AACTAAAGGA AGGCGTGCAT
GAACTCCCCT TTAAGGTAAC CTGCCTGCCC CTTGTCCACC CGGTGCCCTG CACGGGGTAC
CGGTTCGAGA TCGATAACAA GGTAGTGACC TACTGCACGG ATACAGGACT CTGCGACAAT
GCAGTCTCAC TCGCGCGTGA TGCCGATCTT CTTATTACGG AGTGCGGGTT AAAACCGGGG
GAGAAAAGTC CGCTCTGGCC CCATATGAAC CCGGAGGATG CAATTGAGGT TGCCCGGCGG
GCCGGGGCAA AACGTCTGGC GCTGACGCAT TTTGGGGCAG AGGTATATAA GACGCTGGAG
GAACGCCGGG CGTTAAAGGC GCAGTTCGAA AAGGAATGCC CGGGACTTCT GGTATCGGAA
GACGATCTGA CTATAGAGGT CTAA
 
Protein sequence
MQVTFLGTNG WYDSLTGNTV SALITARDYD IILDAGNGIA KADRYMTQDK PAFLFLSHFH 
LDHTEGLHTL VKFRFKKGLS ICGGVGTTAD LAGLLREPYT VPLDRVPFAV TVKELKEGVH
ELPFKVTCLP LVHPVPCTGY RFEIDNKVVT YCTDTGLCDN AVSLARDADL LITECGLKPG
EKSPLWPHMN PEDAIEVARR AGAKRLALTH FGAEVYKTLE ERRALKAQFE KECPGLLVSE
DDLTIEV