Gene Mboo_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0638 
Symbol 
ID5411460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp601177 
End bp602736 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content55% 
IMG OID640867857 
ProductPKD domain-containing protein 
Protein accessionYP_001403799 
Protein GI154150181 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat
[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACCC GTTTCATTTT CCTCACGGGA TTTGTGGTAT TGGTTTGTCT TGCCTGCGTT 
GTTATACCAG TCGGTGCGGA TAACAACACT ACCGCTACTA CTACAACTAC AGCCGTCACT
ACCACGGCTA CGGCTACTCC AACTACGACT GCCACGACTA TAGTAACTAC CACGGCTACG
GCTACTCCGA CTACAACCGC CACTACTGCA GTAACTACCA CGGCTACGGC TACTCCGACT
ACGACTGCCA CTACTGCAGT AACTACCACG GCTACTACAG TAGCAACGAC AACTACGGCA
ACCCCGCTGG TTGCCTCATT CACTGCATCT CCCACTTCGG GTACTGCGCC ACTCACCGTG
CAGTTTGAGG ATACATCCAC CGGCTCTCCA ACAACATGGG ACTGGAACTT TGGAGATGGC
GATTCAAGTA CCAATGAAAA CCCGTCATAT GCGTACACGA CTGCAGGAAC CTACACGGTC
ACCCTCAGTA TCGGGGATGG AGGCACGCTT CCCAGCGCAA CCAGCACTCA GACCACCACG
ATAACGGTAA GCGCGGGGAC TGTCACAACG ACCGTCCCGT CCGTGACAAG CATCTCCCCC
ACTTATGGCC CACTTTCCAC AGGCACTTCG ATAACCATCA CCGGGACAGG CTTTACCGGA
GCAACAGGAA TAACCATAGG GGGGACTGCA GTAACCAGTT TTACCGTTGT CAGCGATACA
GAAATCACCG CAACCACGCC GGCCATCTCC ACCGCCGAAC AGGTTGATGT CCTCGTGACA
ACACCCAGTG GCACATCCTC ATCAGTAGCC GGGGACAAAT ACACCTTTGC GGCTACAGCA
ACTACCGTCC CGCTACCCCT CTTTATCGCC TCACCCACAT CCGGGACGGC TCCGCTGGAA
GTAACATTTA CAGATGAGTC AACCGGCTCC CCGGCAACAT GGGACTGGAA CTTCGGGGAT
GGCAATACCA GTACGCTGCA GAATCCGACT AATACCTATG TAACCAATGG GACGTACTCA
GTGACCCTGA CAGAAGAGAA TTCGATTGGC ACAAATGCAA CAACCCTGAC CGGATACATC
ATAGTCGGAC CTACCATACC TGTTGCAGCG TTCACTGCAT CATCGCTCAG TGGTGCCGCA
CCCCTCACCG TCCAGTTTAC CGATACTTCC ACGGGGTCGC CCACATCCTG GGTGTGGAAC
TTTGGGGACG GAAGTACCGG CACTGCCCAG AATCCCTCAC ACGAATATAC GACATCAGGC
ACCTATACCG CCACCCTTAC TGCCACGAAC GCCGAAGGAA GCAGCACAAA TACCGCTTCC
CAGACCATAA CGGTTGGCTC ATCAGCGATG GCAACGGCCC CCACAACCGC GTATACAACG
GCACCCACCT TTGCAGTTGC CGCTGCACAA TCCACAACTT CTTCTGTGGA TGCCTGGCTG
GCAAAGCAAC AGGCCATTGC CACGGCAACA CCGACCCCTA AATCGCCGGG TTTTGACCTG
ATTGCAGCCC TTATCGGTTG CGGAGTTATT GCCGGTATTG ACCTGTACCG AAAACAGTAA
 
Protein sequence
MNTRFIFLTG FVVLVCLACV VIPVGADNNT TATTTTTAVT TTATATPTTT ATTIVTTTAT 
ATPTTTATTA VTTTATATPT TTATTAVTTT ATTVATTTTA TPLVASFTAS PTSGTAPLTV
QFEDTSTGSP TTWDWNFGDG DSSTNENPSY AYTTAGTYTV TLSIGDGGTL PSATSTQTTT
ITVSAGTVTT TVPSVTSISP TYGPLSTGTS ITITGTGFTG ATGITIGGTA VTSFTVVSDT
EITATTPAIS TAEQVDVLVT TPSGTSSSVA GDKYTFAATA TTVPLPLFIA SPTSGTAPLE
VTFTDESTGS PATWDWNFGD GNTSTLQNPT NTYVTNGTYS VTLTEENSIG TNATTLTGYI
IVGPTIPVAA FTASSLSGAA PLTVQFTDTS TGSPTSWVWN FGDGSTGTAQ NPSHEYTTSG
TYTATLTATN AEGSSTNTAS QTITVGSSAM ATAPTTAYTT APTFAVAAAQ STTSSVDAWL
AKQQAIATAT PTPKSPGFDL IAALIGCGVI AGIDLYRKQ