Gene Mboo_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0625 
Symbol 
ID5410190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp590384 
End bp590944 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID640867844 
ProductYeeE/YedE family protein 
Protein accessionYP_001403786 
Protein GI154150168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAT GCACCCGGAT CCACAATGAC GGTAAAACTC AGCTGGTGCT TGGCCTGTGC 
ATCGGCATCC TGTTCGGTTT CCTTCTCCAG AAAGGCGGCG TGACCAGCTA CGATGTGATT
GTGGGCCAGC TCCTGCTCGA AAATTTCACC GTGGTCAAAG TGATGCTTTC CGCGGTCATT
GTTGCGATGA TCGGCATCCA CCTCCTGGTC CGGTTTGGGT ACGCAGAACT CCATGTCCAT
CCCGGTTCAT GGGGATCGAA CCTGATCGGG GGGCTCATCT TCGGGGTTGG ATTTGCCCTG
CTCGGGCTCT GTCCCGGGAC GGTGGCAGGG GCGGCGGGAA CCGGAGCGCT CGATGCGCTT
GTCGGGGGAA TCCCCGGCAT GCTGGTGGGC TCCGGGCTTT TTATCAGCCT GTACCCGAAG
ATAAAACCCA TCCTCTGCCG GGCGCCGTTT GCGGCCCAGA CACTTCCTGA ATTCCTGCAC
CTGAACCGGT GGATCGTGAT TGTCGTGGTG GAGGTTTGCA TGATCGGCAT CCTCCTCCTG
TTTGCCGGCA TCGGGTTGTA A
 
Protein sequence
MSLCTRIHND GKTQLVLGLC IGILFGFLLQ KGGVTSYDVI VGQLLLENFT VVKVMLSAVI 
VAMIGIHLLV RFGYAELHVH PGSWGSNLIG GLIFGVGFAL LGLCPGTVAG AAGTGALDAL
VGGIPGMLVG SGLFISLYPK IKPILCRAPF AAQTLPEFLH LNRWIVIVVV EVCMIGILLL
FAGIGL