Gene Mboo_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0622 
Symbol 
ID5410187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp587346 
End bp588443 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content62% 
IMG OID640867841 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001403783 
Protein GI154150165 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAC AGACGGGGGA TGCAGGGCAG CGGATCGTCC TGCACGCCGA CATGGACTGC 
TTCTATGCAG CCGTGGAGAT GCACGACCAT CCCGAAATTG CGGGAAAAGC GGTGGTCGTC
GGTGCCGATC CGCAAGGCGG GGCCGGGCGG GGCGTGGTCT CCACTGCCTC GTACGAGGCC
CGGGCGTTTG GCGTGAGATC CGCAATGCCC ATCTCGCAGG CATACCGCCT CTGCCCTGGT
GCAGTATACC TCCGCCCGGA CATGGCCCGG TACGCAGCAG TATCCGCGGA GATCATGGGG
ATCTTCAAGG AGACCGGCTA CCGGGTTCAG CAGGTGAGTA TCGATGAGGC GTTCCTTGAC
ATCAGCCCGG TCAGGAGCTT TGATACGGCA CGGGATCTGG CGGTCCGGCT CAAGCAGACA
ATACGGGATC GGGTCGGGAT CACCTGTTCG CTTGGGGTTG CCCCGTCAAA GATCGTGGCA
AAGATCGCCT CGGGGCACCA GAAGCCCGAC GGTATGACCG TTGTAACACC AGATTCGGCC
CGGGATTTCC TCGCGCCGCT CCCGATCCGG AAAATCCCCG GGATCGGGGG AAAGACCGGG
GCGCAGATTG AAGCGCTCGG GATTACAACG ATTGGCAACC TTGCCACCTG CGATATCCAG
GTCCTTGTCG GGGCATTCGG GAGGTCAGCG GGCCTGCTCC GGGAGGCAGC GCTTGGTCAC
GATAACAGCG AGGTGGTCGA GCGCGACGGG GTCAAATCCA TCTCAAAAGA GACCACCTTT
GCGAACGATA CCGAGGATCC AAAAGAGATT GCCGCCACCA TGGAACTCCT TGTCCGCGAA
GTAGCGCAGG CGATTGCCGA CGAGGCACTG CAGTTTAAGA CCGTCACGAT CCGGGTCAGG
TACGCAGGGT TTGTCTCAAA GACAAAAGCA AGATCCCTCC TCCACTACCA CAACGACGAG
GCCGCGATCC GCGCCGCTGC CGGCGAACTG CTCCGCGAGC TCTGGGACGG AAAACCGATC
CGCAGGCTCG GCCTGAGGCT CTCCACCCTG AGACACCAGG ACTCCCGGCA GCAAACCCTC
TTTGGCTCGT GTCGGTGA
 
Protein sequence
MDGQTGDAGQ RIVLHADMDC FYAAVEMHDH PEIAGKAVVV GADPQGGAGR GVVSTASYEA 
RAFGVRSAMP ISQAYRLCPG AVYLRPDMAR YAAVSAEIMG IFKETGYRVQ QVSIDEAFLD
ISPVRSFDTA RDLAVRLKQT IRDRVGITCS LGVAPSKIVA KIASGHQKPD GMTVVTPDSA
RDFLAPLPIR KIPGIGGKTG AQIEALGITT IGNLATCDIQ VLVGAFGRSA GLLREAALGH
DNSEVVERDG VKSISKETTF ANDTEDPKEI AATMELLVRE VAQAIADEAL QFKTVTIRVR
YAGFVSKTKA RSLLHYHNDE AAIRAAAGEL LRELWDGKPI RRLGLRLSTL RHQDSRQQTL
FGSCR