| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0612 |
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| Symbol | |
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| ID | 5411126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 578246 |
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| End bp | 580168 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640867831 |
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| Product | peptidyl-arginine deiminase |
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| Protein accession | YP_001403773 |
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| Protein GI | 154150155 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase
[COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.778419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGA CTACCCGTAC CATTGCACTC ATCCAGATGG AGATCGGACC GGATCCGGAC
AGGAACCTCA ACGAGGCACG TGAGCGTGTG GAAAAAGCGG CGCAAAACGG GGCACAATTT
ATCTGCCTTC CCGAACTCTT CCGTACCCGG TACTTTCCCC AGCAGATCGG CACTCCCGTA
CAATCGCTTG CAGAGACGAT CCCCGGCGAA TCAACTGACG TATTTACCCG GATTGCAAAG
GAGTACAAGG CAGTTATCAT TGTCCCGGTC TTTGAACGAT CTCCCCTGGG TCACCTGGAG
AACGCGGCAG TTGTTATCGA TGCCGACGGC AGTCTCCATG CGCCCTATTA CAAGGTCCAT
ATCCCTCAGG ACCCGAAATT CTTTGAAAAA GGGTATTTCT ATCCCGGCAA CCACTATGCC
GTGCATGCCA CCCGGTACGG GAAGATCGCC GTTCTTATCT GCTACGACCA GTGGTTCCCC
GAAGCGGCAC GGTGCGTCTC CCTTGAGGGT GCGGAGATCA TCTTCTACCC GACGGCGATA
GGGAATCCCT GCACCGAACA ACCCTCCGAA GGGGACTGGC AGGAGGCATG GGAGATCATC
CAGCGCAGCC ATGCTATAGC AAACAGCGTG CATATTGCCG CTGTCAACCG TGCCGGCGGG
GAAGGAAACA TCCGGTTTTT CGGGGGATCC TTTATCTGCG ACGCATTTGG GAAAGTGCTG
GCCCGGGCCG GCGATGCAAA CGAAACGATC ACGGCTACGG CAGACCTGGA GCTAAATGAA
TCGATCCGAG ACTCCTGGGG ATTTTTCCGG AACCGCCGCC CGGACACGTA TGGCGCCGTC
TGCGCACGGG TACCTGAACA CGATGCAACG GCACCCATTC CCCGCAAAGG GGATACGCCG
AGAAAGCTGG GGTATTCCAT GCCCGCCGAA TGGGAACCGC ATGAGGCAGT CTGGCTCTCG
TGGCCGCACA ACAAATTCAC CTTTCCCGAC CTTGACAGGG TTGAGGAGGC ATACATCCGG
TTCATTGCCG GGATAGCCCC TTCGGAACGG GTGGAACTCT TTGTTCCCAC ACCCATGGCA
AACAGGATGG TAAAGGCACG CCTCCGTACT GCCGGGGTAG ACCTGTCCCG GGTGACGCTG
CGGACGATCC AGTATGCCGA TGTCTGGATC CGCGATTATG GCCCGACGTT CGTGGTAAAC
CCGGCGCTGA AACGGTCGGC AATGGTGCAC TGGAGGTTCA ATGCCTGGGG AGAGAAATAC
CCGGACCAGA TCGCTGACGG GCATGTTCCC GATGACATGA ACCGGTGGCT TGGCCTGCCC
GTCTTTACAC CGGGCATTAT CCTTGAAGGA GGATCGATCG ATACCAACGG GCGGGGCACG
GTGCTGACCA CGCAGGCCTG CCTCTTAAAC CGGAACCGGA ACCCGGAGCT CACCAAAGAC
GAGATCGAGG AATATCTCAA AGAATACCTT GGCGTAGTAA AGATCCTCTG GCTCAACCGG
GGAGTGGCCG GCGATGATAC GGACGGGCAT GTTGATGATA TTGCCCGGTT TGTCTCTCCC
ACCACGATCG TCTGTGCCTA TGAGGAAAAC CCGAAGGATG AAAATTACGC TGCACTCAAC
GAGAATTACG AGATCCTCCG GGCTGCAACT GACCAGGAAG GCAACCCCTT TACTATTATA
AAACTCCCCA TGCCGGCCCC GGTAATGAGC GAGGAAGACC GGTGCCCGGC CAGTTACACG
AATTTCTACA TCGGCAATAC CGTGGTCATT GTCCCGGTCT TTGATGATCC CCAGGACAAA
GAAGCGCTCC GGATCCTCCA GGAACTTTTC CCGGACCGGA CGGTCATGGG AGTAAATGCC
CGGGCCATGG TGGAAGGGTA TGGAACCTTC CATTGCGCCA CCCAGCAGCA GCCCCGGACA
TAA
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| Protein sequence | MPETTRTIAL IQMEIGPDPD RNLNEARERV EKAAQNGAQF ICLPELFRTR YFPQQIGTPV
QSLAETIPGE STDVFTRIAK EYKAVIIVPV FERSPLGHLE NAAVVIDADG SLHAPYYKVH
IPQDPKFFEK GYFYPGNHYA VHATRYGKIA VLICYDQWFP EAARCVSLEG AEIIFYPTAI
GNPCTEQPSE GDWQEAWEII QRSHAIANSV HIAAVNRAGG EGNIRFFGGS FICDAFGKVL
ARAGDANETI TATADLELNE SIRDSWGFFR NRRPDTYGAV CARVPEHDAT APIPRKGDTP
RKLGYSMPAE WEPHEAVWLS WPHNKFTFPD LDRVEEAYIR FIAGIAPSER VELFVPTPMA
NRMVKARLRT AGVDLSRVTL RTIQYADVWI RDYGPTFVVN PALKRSAMVH WRFNAWGEKY
PDQIADGHVP DDMNRWLGLP VFTPGIILEG GSIDTNGRGT VLTTQACLLN RNRNPELTKD
EIEEYLKEYL GVVKILWLNR GVAGDDTDGH VDDIARFVSP TTIVCAYEEN PKDENYAALN
ENYEILRAAT DQEGNPFTII KLPMPAPVMS EEDRCPASYT NFYIGNTVVI VPVFDDPQDK
EALRILQELF PDRTVMGVNA RAMVEGYGTF HCATQQQPRT
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