| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0586 |
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| Symbol | |
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| ID | 5411694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 554836 |
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| End bp | 556149 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640867805 |
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| Product | methyl-coenzyme M reductase, beta subunit |
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| Protein accession | YP_001403747 |
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| Protein GI | 154150129 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4054] Methyl coenzyme M reductase, beta subunit |
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| TIGRFAM ID | [TIGR03257] methyl-coenzyme M reductase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000110254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0430259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAT ACAAGGATAC GATTGACCTC TACGACGATG AGGGTAAGCT CTTAAAGAGC
AACGTCACGA TCGATAAGAT CAGCCCGCTG ACCAACAAGG GAGCGCTTGA GCTTATCGAC
CTCACCAAGA GGACCGTGGC AGTCAACCTC GGCGGTATCG AGGAAGCACT CAAGACCGGA
AAGATGGGCG GCAAGTCCAA CCAGATTCTC GGCCGTGGCC TGAACTACAG CATTGTCAAG
GATGCCGACG CAATTTCAGC CAAGATCAAG GACATGATCC AGGTCACCGA CGGTGACAAC
ACCAAGATCA CCAAGATCGG CGGCGGAAAG ATGCTTCTCG TTGAAGTCCC GTCTTCACGT
ATCAACGCAT CAGCAACCTA CGATGCAACC TCGACCTCTG TGGCATCCGC AACCACCTAC
GCACTGATTG ACCAGTACAA GGTCAACATG TTCGATGGTT CCTATGTCAA GGGTGCAGTC
TGGGGTACCT ACCCGCAGAC CATGGACATG CAGGGCGGCA ACGTCGTTTC TATCCTGTCC
ATCCCCCAGA ACAACGAAGG TCTCGGCTAT GCACTCCGTA ACATCCCGGC CAACCACGCG
GTCATGATGA CCCACCGGAA TGCAATGCAG GGTGCAGCAC TTTCGGCTAC CTTTGAGCAG
GCCGGAGAGT TCGAGATGGG CGCAGCAATC GGCCCGTTCG AGCGTGCACA GCTCCTGCTC
TACGCATACC AGGGCTTAAA CGCAAACAAC ATCGTCTACG ACCTCGTCAA GAAGAACGGC
AAGACCGGTA CCATCGGTAC TGTCGTGCAG AGCCTCGTCG AGCGTGCCAT TGAGGACAAG
GTCATCAAGG CAGGCAAGAA GGGCAAGAGC GGCTATATCT TCTACGACAC CAAGGACCCG
ATGCTGTGGA ACGCCTACGC CTCGGCAGGT ACCCTTGCCG CAACCATGGT CAACTGTGGT
GCGGGACGGT TTGCCCAGGC AGTATCCGCA ACCCTGCTCT ACTTCAACGA CCTGCTCGAG
CACGAGACCG GCCTGCCCGG CTCTGACTTC GGCCGTGCAA TGGGTGTAGC AGTCGGATTC
TCATTCTTCA GCCACTCGAT CTACGGCGGT GGCGGCCCCG GTGGATTCAA CGGTAACCAC
GTCGTTACCC GTCACGCAGC CGGTGTCGGT ATGCCCTGTA TCGTCGCAGC ATGCGCCCTT
GATGCAGGCA CCCAGATGTT TGGCCCCGAG GCCACATCCA AGGTCTACCA GGACACATTC
GGTCAGATTG ACGCGTTCAA GAGACCGATT CAGACCATCG CAAAGGGTGT ATAA
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| Protein sequence | MAKYKDTIDL YDDEGKLLKS NVTIDKISPL TNKGALELID LTKRTVAVNL GGIEEALKTG
KMGGKSNQIL GRGLNYSIVK DADAISAKIK DMIQVTDGDN TKITKIGGGK MLLVEVPSSR
INASATYDAT STSVASATTY ALIDQYKVNM FDGSYVKGAV WGTYPQTMDM QGGNVVSILS
IPQNNEGLGY ALRNIPANHA VMMTHRNAMQ GAALSATFEQ AGEFEMGAAI GPFERAQLLL
YAYQGLNANN IVYDLVKKNG KTGTIGTVVQ SLVERAIEDK VIKAGKKGKS GYIFYDTKDP
MLWNAYASAG TLAATMVNCG AGRFAQAVSA TLLYFNDLLE HETGLPGSDF GRAMGVAVGF
SFFSHSIYGG GGPGGFNGNH VVTRHAAGVG MPCIVAACAL DAGTQMFGPE ATSKVYQDTF
GQIDAFKRPI QTIAKGV
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