| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0572 |
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| Symbol | |
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| ID | 5410776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 542205 |
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| End bp | 543038 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640867791 |
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| Product | tetrahydromethanopterin S-methyltransferase subunit D |
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| Protein accession | YP_001403733 |
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| Protein GI | 154150115 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4060] Tetrahydromethanopterin S-methyltransferase, subunit D |
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| TIGRFAM ID | [TIGR01112] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0410349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.325952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG TAGCAGCAAA GCCGGCAGCA GGCTCGGCAA TAAACCCCAC CGCCATGGTG
ATCGGTATCG TCATGCTCAT CATCCTGCTC GGGATCGCCT ACGTGGTCTC ACCGGGTCTC
GGCCTCATGG CCCTGATCGG CGTGGTCATC GGCGGCGTCC TGATCGGATT CGGCGTCCAC
TTCGTGCCGG TCGGCGGCGC ACCCGCAGCA ATGGGCCAGG CACCCGGTAT CGCAACCGGT
GTCGCCATGC TCGCAGCAGG TGCAGGGCTT GCCGGACTCT TCGGAGGCGC CTGGGCAGCT
GACCAGGGAT TTGTCATCGC CATTATCACG GGCGGTGTCG GCGGCGGCAT GATGATGGCC
ATCACCTGTA TGATGGTCAA CTTCGTGTAC ATCTTCGGCA TGGGCATTCC CGCAGCTTCA
GGCAAGGTAT TAAAGGACCC GATCACCGGG GACTCCCAGC CTGAATACAA GTCGCAGGGT
ACCGAAGGCC ATGGCCTGCC GTTCGTCTCC TTTGTCGGCG GCGTTCTCGG CGGCGTTCTC
GGCGGTGCAG GCGGCACGCT CATCTATCTC GAGCTTCTCA GCCTGTACAA GGCAACGCTC
CCGAACATCA TGAGCATCTC CGCTGCACAG GCACTCCCGA TCGCAGTTGC CACAGCAGGT
ATCTTTGCCA TCGGCATGTT CCTTGTAAAC TCGGTGCTGA CCGCATACAA CATCACCGGA
ACCATCGAGG GCCCGCACGA CCCCAAGTTC AAGCGCTGGC CACGGTCGGT TGTTGCATCC
GCGGTTGCAT CGGCACTCTG CGGTCTTGTG GCGATCCTCA TCGTCACGTT TTGA
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| Protein sequence | MTAVAAKPAA GSAINPTAMV IGIVMLIILL GIAYVVSPGL GLMALIGVVI GGVLIGFGVH
FVPVGGAPAA MGQAPGIATG VAMLAAGAGL AGLFGGAWAA DQGFVIAIIT GGVGGGMMMA
ITCMMVNFVY IFGMGIPAAS GKVLKDPITG DSQPEYKSQG TEGHGLPFVS FVGGVLGGVL
GGAGGTLIYL ELLSLYKATL PNIMSISAAQ ALPIAVATAG IFAIGMFLVN SVLTAYNITG
TIEGPHDPKF KRWPRSVVAS AVASALCGLV AILIVTF
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