| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0533 |
|---|
| Symbol | rpl4lp |
|---|
| ID | 5411760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 519087 |
|---|
| End bp | 519833 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640867752 |
|---|
| Product | 50S ribosomal protein L4P |
|---|
| Protein accession | YP_001403694 |
|---|
| Protein GI | 154150076 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.434154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.425342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC AGGTTAAAAC AATCGAAGGC GGCGTGGCAA AGGATATCGA ACTCCCGGCC
ATGTTCTCCG AGGAGTACCG CCCGGACCTG ATCAGGAAGG CAGTACTGGC ACTCCAGAGC
ACCCGGCGCC AGCCGCACGG GTCCTATCCG TATGCCGGCA TCTGTTCTTC TGCAGTGGGC
TGGGGAAGCG GCCGCGGCGC ATCTCATGTA CCGCGTCTCA AGAACGGTTC CCGTGCCGCC
AAGGTTCCGC AGGCAAAGGG CGGACGTGAG GCACACCCGC CGGTCACCGC CAAGGTGCTG
ATAAAAGAGA TCAATGCAAA AGAGAAGCAG AAGGCATTCC GATCCGCTGT TGCAGCAAGC
ATCCGTGCCG ACCTCATCAG CAGCAGGGGT CACCGGTTCG AAGGAACAGT CCCACTGATC
TTCGAGGACA AGTTCGAGAA CCTGGCAAAA ACCCAGGAAG TCATATCCGC ACTGACAAAT
ATTGGCGTGT ACAGTGATAT CGAGCGTTCA AAGGAGAGCA GGAAGGTCCG CGCCGGCCGT
GGCAAGCTCC GTGGCCGCAG GTACAAGCAG AGAAAGAGCC TGCTTATCGT TACCTCGGGC
CCCGAATTCC GCGCCGCACG CAATCTTGCC GGTGTAGACG TCGTGACTGT AGATCAGCTC
AACGTTGAGC ACCTCGCGCC GGGCATGCAG GCAGGACGCC TGACAGTCTG GACCGAGAGC
GCCGTTATCC GCTTGGAGGG AAGGTAA
|
|---|
| Protein sequence | MKAQVKTIEG GVAKDIELPA MFSEEYRPDL IRKAVLALQS TRRQPHGSYP YAGICSSAVG
WGSGRGASHV PRLKNGSRAA KVPQAKGGRE AHPPVTAKVL IKEINAKEKQ KAFRSAVAAS
IRADLISSRG HRFEGTVPLI FEDKFENLAK TQEVISALTN IGVYSDIERS KESRKVRAGR
GKLRGRRYKQ RKSLLIVTSG PEFRAARNLA GVDVVTVDQL NVEHLAPGMQ AGRLTVWTES
AVIRLEGR
|
|---|
| |