| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0506 |
|---|
| Symbol | |
|---|
| ID | 5411326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 487967 |
|---|
| End bp | 489241 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640867722 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001403667 |
|---|
| Protein GI | 154150049 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACGC CAACCAGTCA TGACGGTATT AGCCGTTTTC ACACTTCCGA AGCAAAATAC
CGGGAGTATT CATCCAGCGC CTTAACGAAG GCTATAGACC TCAAGAGGAT CTCCCAGGAT
GATGCAGATC TCATCCTTGA ATTTGTGCAG GAAGCTAAGG CCACCGGCAA GAAGATCACC
ACTGCACGAT ATTTTAAGAT CATCTCAGTT CTGATTCGCT TGAGAGAGTT TTTCCCGAAG
CCGTTCCGGG AGAGCGTCAT CAAGGATGTC TATGCAGCCC GAGATCGGAT TGAGCAGGCC
AAAACCGCAC GCGGCACACC GTTCAAACAA AATACCGTCG CCGATTTTAT CCGATTCATG
AAACGATTTT TCATGTGGTT GTCGGAGAAC GGAAAGTCTG AGATCCCAGA GAAGAAACTG
AGGGACATTA AACCACCCAA CTACGTGTAT GATACCAAGA CAGCAGACAT GATCTTCACG
AAAGAGGATA TCTTCGGAAT GCTAAAAGCC TGCCAGACCA GCAGGGACAG GGCGATTATC
GCCGTTCTGT ACGATGGAGC ACTTCGCTGT GGTGAACTGG GTACACTCCG GTGGAATCAG
GTGGTGTTCA CCGATGTCGA CGCCACTATC ACGGTCAAAT TCAAGACGGA GAAAACCCGG
CTGATCCCGT TGTTCATGGC GAGGGAATAC CTTGCACAAT GGCGCAACGA TTATCCAGGC
GAACCGATAG GAGAAAACTT TGTGTTCTTG ACATCCGGTG GTGGTCGCAA TCGTACTGGT
CGCAACCAGC TCCAGTATTC AGGCATCGCC AAGCAGATCC GGAATATCGC CGAGCGCGCC
GGTATTAAGA AGCATATCAC TCCTCACCTG TTCCGCCACA GCAAGATAAC TCATCTTATC
CAAGACGGAT GCCAGGAATC GATGATCAAG CTCCTTGGCT GGGGTCATAC CAGCACTGAT
ATGATGGACA AATGCTACGG GCATGTCGGG CCGTCAGATG TCAAGAAAGA GATGGCAAGA
CTCGCCGGTG TGCAGATTGA CGACAAGCCC CGGTCAAAGG TTCTGGAGCC CCGGCAGTGT
CCTCGCTGCG GCACTATCGC AGGCCCGACC CAGCAATGGT GCCCGGTGTG TTCATGTGCA
TTGACACCAG AAGCAGCGGA GAAGGTCAAG ACGGCGACCC AACAGGCTGA GCAGCTGCCG
GAATTTGCTA TGATGCAGAA ACAGATCAAA GATCTTCAGG AGCAGATCAT CGCAATGCAG
AAAGGATCAG CCTGA
|
|---|
| Protein sequence | MTTPTSHDGI SRFHTSEAKY REYSSSALTK AIDLKRISQD DADLILEFVQ EAKATGKKIT
TARYFKIISV LIRLREFFPK PFRESVIKDV YAARDRIEQA KTARGTPFKQ NTVADFIRFM
KRFFMWLSEN GKSEIPEKKL RDIKPPNYVY DTKTADMIFT KEDIFGMLKA CQTSRDRAII
AVLYDGALRC GELGTLRWNQ VVFTDVDATI TVKFKTEKTR LIPLFMAREY LAQWRNDYPG
EPIGENFVFL TSGGGRNRTG RNQLQYSGIA KQIRNIAERA GIKKHITPHL FRHSKITHLI
QDGCQESMIK LLGWGHTSTD MMDKCYGHVG PSDVKKEMAR LAGVQIDDKP RSKVLEPRQC
PRCGTIAGPT QQWCPVCSCA LTPEAAEKVK TATQQAEQLP EFAMMQKQIK DLQEQIIAMQ
KGSA
|
|---|
| |