Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0461 |
Symbol | |
ID | 5412153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 444606 |
End bp | 445211 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640867673 |
Product | peptidylprolyl isomerase |
Protein accession | YP_001403622 |
Protein GI | 154150004 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00270126 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGCGC AATACCTGTT TATTGTCCTT GGCATTCTTA CCTGTGCCCT GCTTTTTTCC TGCGGGTGCA CTCAGCCTGC TACAACCCCG GTACAGACCG CAACCACTGC AGCACCGGAA AGTACCGTCT CAATATCTGC CCCAGATGCA TGGGATCATG TCCTTCTTGA AACGAGCATG GGAAATATCA CAATCGCACT TGATCCCGAA ATGCCGATAA CCGCTGGTAA TTTCGAAAGA CTGGCAAAAA GCGGGTTCTA TGATGGTGTC ATTTTCCATC GCGTCATCCC CGGCTTCATG ATCCAGGGTG GCGACCCCAC CGGCACTGGT GAAGGAGGAC CCGGCTACAC CATCCCTGAC GAGTTTACCA GCCACAACCA TAATCTCCGG GGCACGGTTG CGATGGCTAA CACAGGAGAG CCCAATTCGG GAGGCTCACA ATTCTTCATC AACCTCGTCA ACAATACGTA CCTTGATCCC AACTACCCGG TCTTTGGGAC CGTAACCTCG GGAATGGACG TGGTGGATGC TATCGCGCAG GTTCCCACCG GGGAAAAGAA CCGGCCGATC ACGAACGTAA CGATCCTCCA TGCAGAGATG GTTTGA
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Protein sequence | MTAQYLFIVL GILTCALLFS CGCTQPATTP VQTATTAAPE STVSISAPDA WDHVLLETSM GNITIALDPE MPITAGNFER LAKSGFYDGV IFHRVIPGFM IQGGDPTGTG EGGPGYTIPD EFTSHNHNLR GTVAMANTGE PNSGGSQFFI NLVNNTYLDP NYPVFGTVTS GMDVVDAIAQ VPTGEKNRPI TNVTILHAEM V
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