Gene Mboo_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0461 
Symbol 
ID5412153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp444606 
End bp445211 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content54% 
IMG OID640867673 
Productpeptidylprolyl isomerase 
Protein accessionYP_001403622 
Protein GI154150004 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00270126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGCGC AATACCTGTT TATTGTCCTT GGCATTCTTA CCTGTGCCCT GCTTTTTTCC 
TGCGGGTGCA CTCAGCCTGC TACAACCCCG GTACAGACCG CAACCACTGC AGCACCGGAA
AGTACCGTCT CAATATCTGC CCCAGATGCA TGGGATCATG TCCTTCTTGA AACGAGCATG
GGAAATATCA CAATCGCACT TGATCCCGAA ATGCCGATAA CCGCTGGTAA TTTCGAAAGA
CTGGCAAAAA GCGGGTTCTA TGATGGTGTC ATTTTCCATC GCGTCATCCC CGGCTTCATG
ATCCAGGGTG GCGACCCCAC CGGCACTGGT GAAGGAGGAC CCGGCTACAC CATCCCTGAC
GAGTTTACCA GCCACAACCA TAATCTCCGG GGCACGGTTG CGATGGCTAA CACAGGAGAG
CCCAATTCGG GAGGCTCACA ATTCTTCATC AACCTCGTCA ACAATACGTA CCTTGATCCC
AACTACCCGG TCTTTGGGAC CGTAACCTCG GGAATGGACG TGGTGGATGC TATCGCGCAG
GTTCCCACCG GGGAAAAGAA CCGGCCGATC ACGAACGTAA CGATCCTCCA TGCAGAGATG
GTTTGA
 
Protein sequence
MTAQYLFIVL GILTCALLFS CGCTQPATTP VQTATTAAPE STVSISAPDA WDHVLLETSM 
GNITIALDPE MPITAGNFER LAKSGFYDGV IFHRVIPGFM IQGGDPTGTG EGGPGYTIPD
EFTSHNHNLR GTVAMANTGE PNSGGSQFFI NLVNNTYLDP NYPVFGTVTS GMDVVDAIAQ
VPTGEKNRPI TNVTILHAEM V