Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0460 |
Symbol | |
ID | 5412152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 444076 |
End bp | 444549 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640867672 |
Product | peptidylprolyl isomerase |
Protein accession | YP_001403621 |
Protein GI | 154150003 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.670535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00463405 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACATCCG TACAGGCACC CGAAAAAAGG GTACGGCTCG AAACGAACAT GGGCACAATC ATCATTGCGC TCGACCCGGA TATGCCGATC ACCGCAGGCA ATTTCGAAAC GCTTGCAAAG AAAGGATACT ATGATGGCGT CATCTTCCAC CGTGTGATTG CCGGCTTCAT GATCCAGGGT GGTGACCCCA CCGGCACCGG GAGAGGAGGA CCCGGCTACG TGATCAATGA CGAGTTTACC GCAAAGAACC GGAATGACCG GGGCACCCTC TCGATGGCAA ACGCCGGCCC CAACACCGGC GGCTCACAGT TCTTCATCAA CCTGGTCGGC AACAATTTCC TTGACGGAAA ACACCCGGTC TTCGGGAAAG TCGTAGAGGG CATGGACATC GTAGACAAAA TCGGGTCCAC AAAGACCGAC GCCGGTGACC GGCCCATCAG TCCGGTAAAA ATCCTCCACG CCGTTGTAGA GTGA
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Protein sequence | MTSVQAPEKR VRLETNMGTI IIALDPDMPI TAGNFETLAK KGYYDGVIFH RVIAGFMIQG GDPTGTGRGG PGYVINDEFT AKNRNDRGTL SMANAGPNTG GSQFFINLVG NNFLDGKHPV FGKVVEGMDI VDKIGSTKTD AGDRPISPVK ILHAVVE
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