Gene Mboo_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0460 
Symbol 
ID5412152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp444076 
End bp444549 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content56% 
IMG OID640867672 
Productpeptidylprolyl isomerase 
Protein accessionYP_001403621 
Protein GI154150003 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.670535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00463405 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACATCCG TACAGGCACC CGAAAAAAGG GTACGGCTCG AAACGAACAT GGGCACAATC 
ATCATTGCGC TCGACCCGGA TATGCCGATC ACCGCAGGCA ATTTCGAAAC GCTTGCAAAG
AAAGGATACT ATGATGGCGT CATCTTCCAC CGTGTGATTG CCGGCTTCAT GATCCAGGGT
GGTGACCCCA CCGGCACCGG GAGAGGAGGA CCCGGCTACG TGATCAATGA CGAGTTTACC
GCAAAGAACC GGAATGACCG GGGCACCCTC TCGATGGCAA ACGCCGGCCC CAACACCGGC
GGCTCACAGT TCTTCATCAA CCTGGTCGGC AACAATTTCC TTGACGGAAA ACACCCGGTC
TTCGGGAAAG TCGTAGAGGG CATGGACATC GTAGACAAAA TCGGGTCCAC AAAGACCGAC
GCCGGTGACC GGCCCATCAG TCCGGTAAAA ATCCTCCACG CCGTTGTAGA GTGA
 
Protein sequence
MTSVQAPEKR VRLETNMGTI IIALDPDMPI TAGNFETLAK KGYYDGVIFH RVIAGFMIQG 
GDPTGTGRGG PGYVINDEFT AKNRNDRGTL SMANAGPNTG GSQFFINLVG NNFLDGKHPV
FGKVVEGMDI VDKIGSTKTD AGDRPISPVK ILHAVVE