Gene Mboo_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0407 
Symbol 
ID5410315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp392779 
End bp393618 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content50% 
IMG OID640867621 
Producthypothetical protein 
Protein accessionYP_001403570 
Protein GI154149952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCA TCATCGCGCA AAAAGCCGGC CTCATCAACG AGCCGATGGC CATTCTCTGG 
AGTAACACTA AACCCGAAGG AGCACTTCAG ATGAAACCGA ACACATTTAC CTGTGTTTTG
CCGTTTATTG CACAGGTAGC GATCAAAGGA AAAACCGTGG TTTTCGATCG CGAAACCTAT
GGCTGCCCGG GTGCCCGGGC CGGGCTGGGT TTCGGAAATG GGTTCTACGA TGCCTTTGGG
GGTGCCGGGA TAGATTTTAT GTCGGCTTTC TTTGCTAAGG GAATCGAAAG TAGCAAGGAT
CCGGATGCTT ACAAAGCAAT TTTGAAGTAC ATCCCCGAAC GGGAGCAGTC AAAGTTTATT
CACGGCGAAC GTATTCATAA AAATCAGGAA AAAGCCAAAC AGTATATGAT TAATTTCCCG
GTCACGGATA TCGCTGAAAA GTACGTAATT TTCACCCCCT TGGGAAAGGT AAAGCCGGCT
GAGAAGCCTG TTGCTGTTAT TTTTTTAGCC GATCCCATCC AGTTATCCGG TCTTCTGTGT
CTTTTGGGTG CAATCCGCGA TGAATTGGAC CCGGTTTGGG TTCCTGCCCA AATGGCGGCA
TGCCAGCAAA TTGCGGCCGC CGTGTATTTC GAGGCAAAAA AAGAGCATCC CCGCGCCGTG
CTCGGGTATA CGGATATTGC TGCACGGGAG AATGTAGGAA AGACCATTCC CAAACAGATG
TTTACCTTCG GGGTGCCGTA CTCTCTATTC CTTGAGATGG AGGAGGAGGC GAAGGATGGG
GTATTTGACG GCCCAATCTG GAACGGGCTT GCAGCGGAAC AAAAGGGAAC ACCTGCATGA
 
Protein sequence
MESIIAQKAG LINEPMAILW SNTKPEGALQ MKPNTFTCVL PFIAQVAIKG KTVVFDRETY 
GCPGARAGLG FGNGFYDAFG GAGIDFMSAF FAKGIESSKD PDAYKAILKY IPEREQSKFI
HGERIHKNQE KAKQYMINFP VTDIAEKYVI FTPLGKVKPA EKPVAVIFLA DPIQLSGLLC
LLGAIRDELD PVWVPAQMAA CQQIAAAVYF EAKKEHPRAV LGYTDIAARE NVGKTIPKQM
FTFGVPYSLF LEMEEEAKDG VFDGPIWNGL AAEQKGTPA