| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0402 |
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| Symbol | |
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| ID | 5411418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 387729 |
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| End bp | 390029 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640867616 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001403565 |
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| Protein GI | 154149947 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.371468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGGA TCCTCTATGT CGATGATGAA CCCGGACTCC TTGAAATCGG CAAACTCTTC
CTGGATAGCA CCGGGGAATT TGACGTAAGT ACACTGACCT CTGCCGAAAA GGCACTGGAG
TCTCCTGAGA TCCTGTTATT CGATGCCATC ATATCCGATT ACCAGATGCC CGGGATGGAC
GGGATCTCGT TTTTAAAAAA TATCCGGAAG CGTACCAAGG ATGTCCCGTT TGTCCTCTTT
ACCGGCCGGG GAAGAGAGGA AGTAGTTATC GAGGCCATCA ACAGCGGGGC AGATTTTTAT
CTCCAGAAGG GCGGCCAGCC GACTGCACAA TTCGCCGAGC TGGCACACAA GATCCGGATA
GCGATAGAAC GCCGCAGGGC AATAGATTCA GTAAAAGATT CCGAGCAGCG GCTTACCGAT
ATCATCGATT TTCTCCCCGA CGCAACCTTT GCGATCGACA CAACGGGAAG GGTCATTGCA
TGGAACCGGG CAATGGAACA GATGACAGGA ACCCCGGCTG AAGACATCCG AGGCAAAGGA
AATTACGAAG ATGGCATGGC GTTTTATGGA GAACGACGGC CAATGCTTGC CGATCTTCTC
CTCAATCCCG ATTTTTCCTT TGAAGAAAAA ACCTATACCA ATGTCAGGCG TGCCGGTACA
GGCATCACCG CTGAAGGGCC CGTACAAATC AGGGGAAACT CTCTGCGCTA TCTCTGGGGG
ATCGCCGGGC GTCTGTTTGA CAAAGAAGGA AAATGTACCG GGTCAATAGA GTCAATCCGG
GATATTACTG AACGCAAGGA AGCTGAAAAA GAACTCCAGG CTGCATATGA ACAGATAGCA
GCTGCCGAGG AAGAACTCCG GGGCCAGTAC GAGGAACTGG CCGCCGGTGA CCTGAAGTTA
AAAGAGCGGG AAGCCCAGTT ATGGGCAATC TTTAAAGAAG CGCCCCATGC TATCGCCATC
TCCGACAGCG CAACAGGAAA ATATCTCTCT GTTAACACGC TCTTTGAACA GGGGTCCGGG
CTTGCAGCAT CAGAGATCCT GGGGAAGACC TCTGCTGAGA TCGGTTTTGT CCCCCCGGAA
GAACATGAGC TGCTCTTAAA AGAGTTTATC CGGGAAGGTG GCATCCGGCA GAAGCCCCTG
ACGGCAAAAA TGTGGGATGG CAGAAAGGCA GATATCCTTT TTACCGCCGT ACCCATTGTC
CTGAGCACAA GGACGATCGT CCTTACGATG GTCGTTGATA TCACCGATAT GAAAAGGATC
GAGGATGCCC TCCGGAAACA GGAACAGATC CTCAACGATG CGTTTGCAAG CATCAAAGAC
GGCATCTCTC TCCTTGATAA GACGATGACG GTCATCCGCG TCAACAAAAC AATGGAGGAA
TGGTATTCGC ATGAAATGCC CCTTATCGGC CGCAAATGCT GGGAGGTATA CCATGGACGG
GCCGGGCCCT GCGATATCTG CCCCACTCTT CATACACTTA AGGAGGGAAA ACCTGCAAAG
GAACGTGTCC CGCTGGTAGA TGCCGGGGAA GTCACCGGCT GGCTCGATCT GTACAGCTAT
CCTGTGATCG ATTCAGCTAC CGGTGAGATG ACCGGAGTCA TCGAATATGT ACGCAACGTA
ACCGAAGAGA CAAAAGCGCA GAGGGACCTG GAGCTCGCAA ACAAAAAACT CAACCTCCTC
TCCTCAACTA CCCGGCATGA TATCCTAAAT ACCCTCACCG GCCTCCAGGG GCTTGTGGAT
AAGGCTGCAT CACTGAGCAC AAGCGGGGAA TGCACGCACC TCCTCTCCCA GATCCGGGAC
CGGGCCGGTA TTATCCGGCA GCAGATCGAT TTCACCGGAC GCTACCAGGA AGTGGGGGTG
CATGCACCAC TCTGGCAGGA CGTTAATGTG CTCCTCTCCC GGATCCTCCC GGCAACTCCC
CGTACAAAGG CAGGTATCGT CAATGATTGT GATAACGTGG AGATCTTTTC TGATCCCCTG
CTGGAAAAAG TGCTCTATAA CCTTGTTAAC AATGCCCTTA AGTACGGGGG CCCTGACCTT
ACCACGGTTC ATATAACCTC AGACCTGTCC GCACCGGAAC TGATCATTGC TGTCGCCGAT
GACGGCGTGG GAATAGCAGC CGGGGATAAG GACCACCTCT TCCAGCGGGA GGTTGGCCAG
AAGACCGGGT CCGGCCTCTT CCTTGCCCGG GAGATCCTCA GTATCACGGG CATTACGATC
AGGGAGACCG GTACCCCGGG AAAAGGCGCC CGTTTTGAGA TTCTCGTGCC GCCCGAAGCC
TGGCGGAAAA AGCGGCAGTA A
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| Protein sequence | MYRILYVDDE PGLLEIGKLF LDSTGEFDVS TLTSAEKALE SPEILLFDAI ISDYQMPGMD
GISFLKNIRK RTKDVPFVLF TGRGREEVVI EAINSGADFY LQKGGQPTAQ FAELAHKIRI
AIERRRAIDS VKDSEQRLTD IIDFLPDATF AIDTTGRVIA WNRAMEQMTG TPAEDIRGKG
NYEDGMAFYG ERRPMLADLL LNPDFSFEEK TYTNVRRAGT GITAEGPVQI RGNSLRYLWG
IAGRLFDKEG KCTGSIESIR DITERKEAEK ELQAAYEQIA AAEEELRGQY EELAAGDLKL
KEREAQLWAI FKEAPHAIAI SDSATGKYLS VNTLFEQGSG LAASEILGKT SAEIGFVPPE
EHELLLKEFI REGGIRQKPL TAKMWDGRKA DILFTAVPIV LSTRTIVLTM VVDITDMKRI
EDALRKQEQI LNDAFASIKD GISLLDKTMT VIRVNKTMEE WYSHEMPLIG RKCWEVYHGR
AGPCDICPTL HTLKEGKPAK ERVPLVDAGE VTGWLDLYSY PVIDSATGEM TGVIEYVRNV
TEETKAQRDL ELANKKLNLL SSTTRHDILN TLTGLQGLVD KAASLSTSGE CTHLLSQIRD
RAGIIRQQID FTGRYQEVGV HAPLWQDVNV LLSRILPATP RTKAGIVNDC DNVEIFSDPL
LEKVLYNLVN NALKYGGPDL TTVHITSDLS APELIIAVAD DGVGIAAGDK DHLFQREVGQ
KTGSGLFLAR EILSITGITI RETGTPGKGA RFEILVPPEA WRKKRQ
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