Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0360 |
Symbol | |
ID | 5411422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 354537 |
End bp | 355679 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640867574 |
Product | hypothetical protein |
Protein accession | YP_001403523 |
Protein GI | 154149905 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03187] DGQHR domain [TIGR03233] DNA sulfur modification protein DndB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.102743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00986478 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGGTTG CGGCGTTAGA TGAAGTTGAT GATCTGGAGA CTGCGGTATT TTCTTTTCCT GCAATTCGCG GCACTCAAGC GGGTAGAGAA TATTATTCCG CTATGGTTCA GCTGAAGCTC GTTCCGACAA TTTTTCGATT CAACGAATCG GAAGTTCCAG CACAGGTTAG AGCACAACGC GTTCTGAATC ACGCACGGAT TCCAGAAATT GCACACTATA TTATAAGCAA TCCCCACGAC TACGTTTTTT CATCAATTGC AGCGTCAATA AGTGAAGTTC CGGTAAAATT CGTTCCCGCT CCACAAGATA ACCCGAATAG CAGAGTCGGA AAAATTATCA TACCCATGGG CGCGAGGGTT CTCATCAATG ATGGGCAACA CCGAAGAGCG GCAATCGAAT CAGCTCTTAA AGAGCGGCCA GAGCTTGGCA ATGAAACAAT ATCCGTGGTT TTTTTTATAG ATACAGGATT GAAGCGCAGC CAGCAGATGT TTTCAGATCT GAACCGTCAC GCTGTGAGAC CGACAAAATC TATAAGCATT CTTTACGATT CACGAGAGGC ATTCGCTCAA TCTGTACGTG ATATCGCAAC TTCACTTCCA ATTTTCAAAG ATCTCACCGA ATTTGAAAAA ACATCAATCT CAAACAGATC AAGAAAAATG TTCACGCTCT CTACGATTTA TCAAGCGACC GCTGCACTTC TCGGAAAGAA GACTAAAGTA AAAAAAATAA CAAATGATGA GGAAAAACTT GCCTCCAAAT ATTGGAATAT AGTGGCTGAT AATATTCCCG AGTGGCAACA ATTGATCCGA GGAGATGTTG CCAGCAGTTC ACTTCGTAAT GATTTCATTC ACGCCCACGG AATCGCTCTT CATGCACTCG GTCTTGCGGG TCATGCCCTC ATTGAAGAAT ATCCTGATAC TTGGGAAGAA AAATTGGAAA ATCTTCATAA GATTGACTGG TCTCGTTCAA ATGCAGAGGT CTGGGAAGGG CGTGCAATGA ATAACGGAAC TATATCCAAA TCCCAGATGA ATCTCGCATT AACCACAAAC TACCTCAAAT ATATCTTAAC CTTACCTCTT ACGAAAGAAG AAGAAAAAAA TGAAAAGAAA TACCAGACAC AAGTTCGTGG AAAGTTAAGA TGA
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Protein sequence | MKVAALDEVD DLETAVFSFP AIRGTQAGRE YYSAMVQLKL VPTIFRFNES EVPAQVRAQR VLNHARIPEI AHYIISNPHD YVFSSIAASI SEVPVKFVPA PQDNPNSRVG KIIIPMGARV LINDGQHRRA AIESALKERP ELGNETISVV FFIDTGLKRS QQMFSDLNRH AVRPTKSISI LYDSREAFAQ SVRDIATSLP IFKDLTEFEK TSISNRSRKM FTLSTIYQAT AALLGKKTKV KKITNDEEKL ASKYWNIVAD NIPEWQQLIR GDVASSSLRN DFIHAHGIAL HALGLAGHAL IEEYPDTWEE KLENLHKIDW SRSNAEVWEG RAMNNGTISK SQMNLALTTN YLKYILTLPL TKEEEKNEKK YQTQVRGKLR
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