Gene Mboo_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0294 
Symbol 
ID5411651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp281654 
End bp282781 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content55% 
IMG OID640867510 
Producthypothetical protein 
Protein accessionYP_001403459 
Protein GI154149841 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCT TCATGTTCAC GGCGGACTCT CCGGATGAGC TCTCGCATGG GATCCGTGAG 
CAGCAATCAC GTTTTACCCC GACTCTTGCG ATTGTTTTCT CTTCTCCGTC GCTCGATATG
GGGGCCTGTG TCCGGGCCCT TGAAGGATCA GGATGTGATG TTTTTGGTGC ATCAACTGCA
GGGGAGATCC TGACCGGTGC CGGGGCTTCA AAGGTCTTTG AGCAGTCCGC CACCTGCTGC
CTGCTCGATC CGGACCCGTC GATCTTTGCG GTCCGTCTCT TTCCTCGCAA CGACGTCCCC
CCATTTGAAC TGGGGGAGCA GGCAGGCCGC TGGGCAGCCG GCTGTTTTGC ACAGCCGGCT
ATTCTTTTGG CGGTTTCGGG GCTTACCAAT AACGCCGAGG CGATTATCCG TGGGATGGAA
AAACATCTCC CGACAGGCAC GGTGATTGCC GGGGGCGTTG CCGCTGATGA CACGGCGTTT
CTTGAAACTA CGGTCTTTAC GGCAACCTCC CTAACAAGCG ATGGTATTGT AGTGCTGGCA
TTTGACACCG CCCGAGTCTC CCTTTCCAGT TTTACCACGA GCGGGTGGAC CGGTATTGGT
GTGGAAATGA CAGTTATGTC TTCCGCCGGC AACATTGTCC GGCAAATCGA CGGAAAAAAC
CCGCTCGATC TCGTTGCAGA TTACCTCAAT ATCAGTAAAG AGGTTGTGGT CAGCACGGCG
CTGAATTTTC CGATGCTGGT ACAACGGCCC GATGGAAGCG AAGTGCTCAG GACTGCACTT
TCCGCAGATT ACACAACCGG TGCCCTGATC TATGCCGGGA GTGTCCCTGA AGGATCAAAG
ATCCGGTTTT CGAGCTCCTT TGGTACTGAG ACCATTGAAA AAACTATCCG TGAAATGATC
GCGTACTATG AAAAGAATCC CGAGGCTGAT CTGGTCATCC TCTTTGACTG CTGTGCCCGC
CACCAGGCCG CCGGTGCCTA CGTAAACGAC GAGATCTCCG CCATCGCCGA TCTCTGGAAG
GTACCGGTCA TCGGTTTTTT CACGTATGGC GAGATCGGGC ATTCACCTTC AGGGAAATGC
GATCTTTTTA ACGAGACGCT CTCCCTTGCC CTGCTCAAAT TCAGATGA
 
Protein sequence
MHTFMFTADS PDELSHGIRE QQSRFTPTLA IVFSSPSLDM GACVRALEGS GCDVFGASTA 
GEILTGAGAS KVFEQSATCC LLDPDPSIFA VRLFPRNDVP PFELGEQAGR WAAGCFAQPA
ILLAVSGLTN NAEAIIRGME KHLPTGTVIA GGVAADDTAF LETTVFTATS LTSDGIVVLA
FDTARVSLSS FTTSGWTGIG VEMTVMSSAG NIVRQIDGKN PLDLVADYLN ISKEVVVSTA
LNFPMLVQRP DGSEVLRTAL SADYTTGALI YAGSVPEGSK IRFSSSFGTE TIEKTIREMI
AYYEKNPEAD LVILFDCCAR HQAAGAYVND EISAIADLWK VPVIGFFTYG EIGHSPSGKC
DLFNETLSLA LLKFR